RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 YIPF1Q9Y548 306 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 SLC4A7Q9Y6M7 1214 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 CEP290O15078 2479 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 MCF2LO15068 1137 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 TEX28O15482 410 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 MFSD11O43934 449 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 ARHGEF15O94989 841 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 RARGP13631 454 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 ATP2A2P16615 1042 aaKnown RBP18.21■□□□□ 0.51
PHGDH-232ENST00000641947 HMGA1P17096 107 aaKnown RBP18.21■□□□□ 0.51
PHGDH-232ENST00000641947 ARL4AP40617 200 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 NNTQ13423 1086 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 TPGS2Q68CL5 300 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 RFX8Q6ZV50 586 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.21■□□□□ 0.51
PHGDH-232ENST00000641947 RAD9AQ99638 391 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 CYP4F11Q9HBI6 524 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 AAASQ9NRG9 546 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
PHGDH-232ENST00000641947 FAM53CQ9NYF3 392 aa18.21■□□□□ 0.51
PHGDH-232ENST00000641947 XPO7Q9UIA9 1087 aaKnown RBP18.21■□□□□ 0.51
PHGDH-232ENST00000641947 DOCK6Q96HP0 2047 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 H3BRJ5 948 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 SGK1O00141 431 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 EEF2KO00418 725 aaKnown RBP18.2■□□□□ 0.5
PHGDH-232ENST00000641947 DCLK1O15075 740 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 ATP8B1O43520 1251 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 TUFMP49411 452 aaKnown RBP18.2■□□□□ 0.5
PHGDH-232ENST00000641947 LMNB2Q03252 620 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 RHBDF2Q6PJF5 856 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 ARHGAP18Q8N392 663 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 SNF8Q96H20 258 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 CCSER2Q9H7U1 834 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 COMMD8Q9NX08 183 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 CLIC5Q9NZA1 410 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 DTLQ9NZJ0 730 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 WHRNQ9P202 907 aa18.2■□□□□ 0.5
PHGDH-232ENST00000641947 CARNS1A5YM72 827 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 TLL1O43897 1013 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 CTSAP10619 480 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 GBP1P32455 592 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 ITGA8P53708 1063 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 EFEMP1Q12805 493 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 ARL13BQ3SXY8 428 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 TP53INP2Q8IXH6 220 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 FAM71DQ8N9W8 422 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 RNF34Q969K3 372 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 SLC39A13Q96H72 371 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 FCRL2Q96LA5 508 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-232ENST00000641947 FMO2Q99518 471 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 TXLNGYQ9BZA5 131 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 ADAM7Q9H2U9 754 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 USP29Q9HBJ7 922 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 RXFP1Q9HBX9 757 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 TLR8Q9NR97 1041 aaKnown RBP18.19■□□□□ 0.5
PHGDH-232ENST00000641947 NYNRINQ9P2P1 1898 aaKnown RBP18.19■□□□□ 0.5
PHGDH-232ENST00000641947 HSFX1Q9UBD0 423 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 OR12D3Q9UGF7 316 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 MYO7AQ13402 2215 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 MYO18AQ92614 2054 aaKnown RBP18.19■□□□□ 0.5
PHGDH-232ENST00000641947 KCNU1A8MYU2 1149 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 IFNB1P01574 187 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 CNPP09543 421 aaKnown RBP18.19■□□□□ 0.5
PHGDH-232ENST00000641947 HSPA9P38646 679 aaKnown RBP18.19■□□□□ 0.5
PHGDH-232ENST00000641947 ADCY8P40145 1251 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-232ENST00000641947 P3H1Q32P28 736 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 BRMS1LQ5PSV4 323 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 TMC3Q7Z5M5 1100 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 MREGQ8N565 214 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 CCDC89Q8N998 374 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 SERPINB11Q96P15 392 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 OLFM3Q96PB7 478 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 PCDH9Q9HC56 1237 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 FNIP2Q9P278 1114 aa18.19■□□□□ 0.5
PHGDH-232ENST00000641947 H7C0C1 242 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 PAGE1O75459 146 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 LRIG2O94898 1065 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 SPATA31D3P0C874 917 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 MYOGP15173 224 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 ERCC2P18074 760 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 DNAJB1P25685 340 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 ATP5OP48047 213 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 TPI1P60174 286 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 PPP2R5DQ14738 602 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 UBAP2Q5T6F2 1119 aaKnown RBP18.18■□□□□ 0.5
PHGDH-232ENST00000641947 IZUMO3Q5VZ72 239 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
PHGDH-232ENST00000641947 SPATA31D4Q6ZUB0 917 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
PHGDH-232ENST00000641947 PHOSPHO2Q8TCD6 241 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 PWWP2AQ96N64 755 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 ALG13Q9NP73 1137 aaKnown RBP18.18■□□□□ 0.5
PHGDH-232ENST00000641947 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
PHGDH-232ENST00000641947 CSPG5O95196 566 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 ZFXP17010 805 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 RBL1P28749 1068 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 CCR1P32246 355 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 RPL22P35268 128 aaKnown RBP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 CHKAP35790 457 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms