RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ADIGQ0VDE8 80 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 ZBTB6Q15916 424 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 DCAF6Q58WW2 860 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 SYPL2Q5VXT5 272 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 HFE2Q6ZVN8 426 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 MAB21L3Q8N8X9 362 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 STKLD1Q8NE28 680 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 MCUR1Q96AQ8 359 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 MOCOSQ96EN8 888 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 ZNF778Q96MU6 729 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 SHCBP1LQ9BZQ2 653 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 ADAMTS10Q9H324 1103 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 EMCNQ9ULC0 261 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 NUP205Q92621 2012 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 B2RBV5 119 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 GCATO75600 419 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 ARRB2P32121 409 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 GNL1P36915 607 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 MAGEA6P43360 314 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 NME3Q13232 169 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 OTUD1Q5VV17 481 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 CDKL3Q8IVW4 592 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 HACE1Q8IYU2 909 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 MICAL1Q8TDZ2 1067 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 HTR3CQ8WXA8 447 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 USP6NLQ92738 828 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 FAXDC2Q96IV6 333 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 AGAP3Q96P47 875 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 SIRPGQ9P1W8 387 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 USP3Q9Y6I4 520 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 TRIP12Q14669 1992 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 I3L4J1 428 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 TPP1O14773 563 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 ERVK-10P10266 1014 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 PSMB4P28070 264 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 MLH1P40692 756 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 COLGALT1Q8NBJ5 622 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 CCNYQ8ND76 341 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 AZIN2Q96A70 460 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 QKIQ96PU8 341 aaKnown RBP eCLIP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 ANLNQ9NQW6 1124 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 ZNF180Q9UJW8 692 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 PRR5-ARHGAP8B1AHC4 643 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 FAM72CH0Y354 149 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 I6L893 689 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 RNF103O00237 685 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 DNAJC6O75061 913 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 TBX10O75333 385 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 TGDSO95455 350 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 MMP3P08254 477 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 RARBP10826 455 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 CCNFP41002 786 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 TUBP50607 506 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 ARHGAP8P85298 464 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 FAM72AQ5TYM5 149 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 FAM72DQ6L9T8 149 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 SLC26A9Q7LBE3 791 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 PIGZQ86VD9 579 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 FAM72BQ86X60 149 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 SLC25A41Q8N5S1 370 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 ENDOVQ8N8Q3 282 aaKnown RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 ARRDC4Q8NCT1 418 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 RBM15BQ8NDT2 890 aaKnown RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 CENPIQ92674 756 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 TRIM6Q9C030 488 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-223ENST00000641597 PCDHA11Q9Y5I1 949 aa17.35■□□□□ 0.37
PHGDH-223ENST00000641597 SMIM28A0A1B0GU29 152 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 TRDMT1O14717 391 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 GPR32O75388 356 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 KRT38O76015 456 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 STAU1O95793 577 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 BPGMP07738 259 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 SULT1E1P49888 294 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 CCNG1P51959 295 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 BST2Q10589 180 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 FBXO47Q5MNV8 452 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 WASHC2DQ5SRD0 308 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 SLC27A1Q6PCB7 646 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 RPAINQ86UA6 219 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 SPNS2Q8IVW8 549 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 ANKRD52Q8NB46 1076 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 MCUQ8NE86 351 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 GPRC5AQ8NFJ5 357 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 ARNTL2Q8WYA1 636 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 P2RY11Q96G91 374 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 RILPQ96NA2 401 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 SYBUQ9NX95 663 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 MOCS1Q9NZB8 636 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 HBS1LQ9Y450 684 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 CCDC78A2IDD5 438 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 MEIS3P2A8K0S8 358 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 CAPN14A8MX76 684 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 KPNA7A9QM74 516 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 PTPN9P43378 593 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 THOC5Q13769 683 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 PDE1CQ14123 709 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 FASTKD1Q53R41 847 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 N4BP2L1Q5TBK1 243 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 VWA5B1Q5TIE3 1220 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms