RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PSD3Q9NYI0 1048 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 IRAK2O43187 625 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 MAP3K6O95382 1288 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 ARPP19P56211 112 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 TPI1P60174 286 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 BASP1P80723 227 aaKnown RBP16.99■□□□□ 0.31
PHGDH-216ENST00000641375 EIF4EBP2Q13542 120 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-216ENST00000641375 PAFAH1B3Q15102 231 aaKnown RBP16.99■□□□□ 0.31
PHGDH-216ENST00000641375 HIF1AQ16665 826 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 KYNUQ16719 465 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 USP41Q3LFD5 358 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 BRMS1LQ5PSV4 323 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 C6orf118Q5T5N4 469 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 HEATR6Q6AI08 1181 aaKnown RBP16.99■□□□□ 0.31
PHGDH-216ENST00000641375 TFB1MQ8WVM0 346 aaKnown RBP16.99■□□□□ 0.31
PHGDH-216ENST00000641375 ETNK2Q9NVF9 386 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 NINJ2Q9NZG7 142 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 IL37Q9NZH6 218 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 RAD54BQ9Y620 910 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 MTMR11A4FU01 709 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 RTN3O95197 1032 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-216ENST00000641375 GTF2A1P52655 376 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-216ENST00000641375 ARL4CP56559 192 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 ICE2Q659A1 982 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 B4GALNT4Q76KP1 1039 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 SCD5Q86SK9 330 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 TOP1MTQ969P6 601 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 PGM2Q96G03 612 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 CWH43Q9H720 699 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 SAYSD1Q9NPB0 183 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 OR12D3Q9UGF7 316 aa16.99■□□□□ 0.31
PHGDH-216ENST00000641375 MYO1CO00159 1063 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 DCLK1O15075 740 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 CHADO15335 359 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 EIF3HO15372 352 aaKnown RBP eCLIP16.98■□□□□ 0.31
PHGDH-216ENST00000641375 EFCAB14O75071 495 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 GCATO75600 419 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 TIMP1P01033 207 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 AMHP03971 560 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 CCR1P32246 355 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 PDK1Q15118 436 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 LRRC26Q2I0M4 334 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 PPP1R21Q6ZMI0 780 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 BCL7CQ8WUZ0 217 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-216ENST00000641375 VWCEQ96DN2 955 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 SPATA17Q96L03 361 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 KLC2Q9H0B6 622 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 OSBPL2Q9H1P3 480 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 ANLNQ9NQW6 1124 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 COMMD8Q9NX08 183 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 ARHGEF38Q9NXL2 777 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 A0A1W2PQH9 124 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 FAM92AA1XBS5 289 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 FAM72CH0Y354 149 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 I6L893 689 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-216ENST00000641375 RASGRF2O14827 1237 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 PPP1R12AO14974 1030 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-216ENST00000641375 MFSD11O43934 449 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 EFEMP2O95967 443 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 PSEN1P49768 467 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 MGAT5BQ3V5L5 792 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 FAM72AQ5TYM5 149 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 FAM72DQ6L9T8 149 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 FAM72BQ86X60 149 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 SH2D3CQ8N5H7 860 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 IGSF21Q96ID5 467 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 SERPINB11Q96P15 392 aa16.98■□□□□ 0.31
PHGDH-216ENST00000641375 FRMD8Q9BZ67 464 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-216ENST00000641375 BCCIPQ9P287 314 aaKnown RBP eCLIP16.98■□□□□ 0.31
PHGDH-216ENST00000641375 XPO7Q9UIA9 1087 aaKnown RBP16.98■□□□□ 0.31
PHGDH-216ENST00000641375 CARNS1A5YM72 827 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 C5orf60A6NFR6 353 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 ALOX15BO15296 676 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 NCAM2O15394 837 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 ABHD2P08910 425 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 ERCC2P18074 760 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 NR1D1P20393 614 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 YWHAQP27348 245 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 GPR15P49685 360 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 RPL10AP62906 217 aaKnown RBP16.97■□□□□ 0.31
PHGDH-216ENST00000641375 PPP2R5DQ14738 602 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 EMC10Q5UCC4 262 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 SDHAF4Q5VUM1 108 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 RSPO2Q6UXX9 243 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-216ENST00000641375 RNF19BQ6ZMZ0 732 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 TAS1R1Q7RTX1 841 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 PDIK1LQ8N165 341 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 FBXO22Q8NEZ5 403 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 HTR3CQ8WXA8 447 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 C9orf72Q96LT7 481 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 HAPLN3Q96S86 360 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 CCDC77Q9BR77 488 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 STMN4Q9H169 189 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-216ENST00000641375 NMUR1Q9HB89 426 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 RAB6BQ9NRW1 208 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 CDY1Q9Y6F8 540 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 GREB1Q4ZG55 1949 aa16.97■□□□□ 0.31
PHGDH-216ENST00000641375 A6NNZ2 444 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 STK10O94804 968 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms