RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ZNF500O60304 480 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 RNF8O76064 485 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 PRAMEF12O95522 483 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 SLC2A3P11169 496 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 CCR1P32246 355 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 CTNNA1P35221 906 aaKnown RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 KCNQ1P51787 676 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 TBX4P57082 545 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 ETF1P62495 437 aaKnown RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 DEUP1Q05D60 604 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 USP4Q13107 963 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 CBX2Q14781 532 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 SMAD2Q15796 467 aaKnown RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 ZNF77Q15935 545 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 C5orf22Q49AR2 442 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 BOLA3Q53S33 107 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 ZC3H12AQ5D1E8 599 aaKnown RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 FAM78AQ5JUQ0 283 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 ACBD5Q5T8D3 534 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 MANEALQ5VSG8 457 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 DAB2IPQ5VWQ8 1189 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 HTR3DQ70Z44 454 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 RSRC2Q7L4I2 434 aaKnown RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 DAAM2Q86T65 1068 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 ARID3BQ8IVW6 561 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 CCDC185Q8N715 623 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 TSC1Q92574 1164 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 SMARCD2Q92925 531 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 HLA-CQ95604 372 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 RSPRY1Q96DX4 576 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 LRRC3BQ96PB8 259 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 WDR24Q96S15 920 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 PRMT1Q99873 361 aaKnown RBP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 APOL5Q9BWW9 433 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 FAM204AQ9H8W3 233 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 GKN1Q9NS71 199 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 TDP1Q9NUW8 608 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCARB2-225ENST00000640900 FZD10Q9ULW2 581 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 NEU3Q9UQ49 428 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 CCL26Q9Y258 94 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 JRKLQ9Y4A0 524 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 PCDHA3Q9Y5H8 950 aa9.47□□□□□ -0.89
SCARB2-225ENST00000640900 IGLV3-10A0A075B6K4 115 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 SLC12A8A0AV02 714 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 E2F8A0AVK6 867 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 MIF4GDA9UHW6 222 aaKnown RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 H3BQ06 376 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 LEFTY2O00292 366 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 KIF5CO60282 957 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 TUBB4AP04350 444 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 LAMP2P13473 410 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 KCNA5P22460 613 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 IL4RP24394 825 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 HOXC13P31276 330 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 MLLT6P55198 1093 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 CCDC85BQ15834 202 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 DPYSL2Q16555 572 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 CDO1Q16878 200 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 FAM133BQ5BKY9 247 aaKnown RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 PIK3R6Q5UE93 754 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 PAPD7Q5XG87 772 aaKnown RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 NUGGCQ68CJ6 796 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 NADSYN1Q6IA69 706 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 FAM131BQ86XD5 332 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 MIB1Q86YT6 1006 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 UNC45BQ8IWX7 931 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 KATNAL2Q8IYT4 538 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 SLC35F6Q8N357 371 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 ZSCAN18Q8TBC5 510 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 ING5Q8WYH8 240 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 ALG3Q92685 438 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 KRT35Q92764 455 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 FAF2Q96CS3 445 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 WDCPQ9H6R7 721 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 KIF9Q9HAQ2 790 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 XPO7Q9UIA9 1087 aaKnown RBP9.46□□□□□ -0.9
SCARB2-225ENST00000640900 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 AMFRQ9UKV5 643 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 HYOU1Q9Y4L1 999 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 CPQQ9Y646 472 aa9.46□□□□□ -0.9
SCARB2-225ENST00000640900 CCDC66A2RUB6 948 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 PRPSAP2O60256 369 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 PAGE1O75459 146 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 FTCDO95954 541 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 CKMP06732 381 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 KRT7P08729 469 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 RARAP10276 462 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 MBL2P11226 248 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 PRLRP16471 622 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 L1CAMP32004 1257 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 PTPN7P35236 360 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 MARCKSL1P49006 195 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 HCAR3P49019 387 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 ZNF135P52742 658 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 AMPD2Q01433 879 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 FCHO2Q0JRZ9 810 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms