RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	FAM72C	H0Y354	149 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	PDE2A	O00408	941 aa	Predicted RBP	18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	FGF19	O95750	216 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	MOCS2	O96007	188 aa	Predicted RBP	18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	KDELR1	P24390	212 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	L1CAM	P32004	1257 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	COL19A1	Q14993	1142 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	DPYSL2	Q16555	572 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	BRMS1L	Q5PSV4	323 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	FAM72A	Q5TYM5	149 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	FAM72D	Q6L9T8	149 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	FAM72B	Q86X60	149 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	LEMD2	Q8NC56	503 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	ADAMTS19	Q8TE59	1207 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	PCDH18	Q9HCL0	1135 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	CLDND1	Q9NY35	253 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	CDC23	Q9UJX2	597 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	CEP104	O60308	925 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	MBL2	P11226	248 aa	Predicted RBP	18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	IL4R	P24394	825 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	CDKN2B	P42772	138 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	CDH6	P55285	790 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	ADCY2	Q08462	1091 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	MMRN1	Q13201	1228 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	DPYSL3	Q14195	570 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	ARTN	Q5T4W7	220 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	GPR158	Q5T848	1215 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	FAM71B	Q8TC56	605 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	PBK	Q96KB5	322 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	ZSWIM3	Q96MP5	696 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	SMG9	Q9H0W8	520 aa	Known RBP	18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	HBS1L	Q9Y450	684 aa	Known RBP	18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	CPQ	Q9Y646	472 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	COL6A3	P12111	3177 aa		18.41	■□□□□ 0.54
SPIN3-238	ENST00000640421	HELZ	P42694	1942 aa	Known RBP	18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	TCRBV7S2A1N4T	A0A589	114 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	CES2	O00748	559 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	PAGE1	O75459	146 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	STC2	O76061	302 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	CKM	P06732	381 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	RING1	Q06587	406 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	SEMA3B	Q13214	749 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	CBX2	Q14781	532 aa	Predicted RBP	18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	SPOCD1	Q6ZMY3	1216 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	CCDC50	Q8IVM0	306 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	RASGEF1C	Q8N431	466 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	KCTD6	Q8NC69	237 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	S1PR5	Q9H228	398 aa		18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	MRPS23	Q9Y3D9	190 aa	Known RBP	18.4	■□□□□ 0.54
SPIN3-238	ENST00000640421	KLKB1	P03952	638 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	SRGAP2B	P0DMP2	458 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	IRF1	P10914	325 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	KRT10	P13645	584 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	AIF1	P55008	147 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	TAZ	Q16635	292 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	ARL13B	Q3SXY8	428 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	EFHC2	Q5JST6	749 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	PIK3R6	Q5UE93	754 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	EP400NL	Q6ZTU2	488 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	PSTK	Q8IV42	348 aa	Known RBP	18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	RCOR2	Q8IZ40	523 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	MYLIP	Q8WY64	445 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	TSC1	Q92574	1164 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	RBM41	Q96IZ5	413 aa	Known RBP	18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	GAS2L1	Q99501	681 aa	Predicted RBP	18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	HEMGN	Q9BXL5	484 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	CALN1	Q9BXU9	219 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	CCL26	Q9Y258	94 aa		18.39	■□□□□ 0.54
SPIN3-238	ENST00000640421	TRAV19	A0A0A6YYK7	116 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	GREM1	O60565	184 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	HOXB8	P17481	243 aa	Predicted RBP	18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	SLC7A9	P82251	487 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	COG7	P83436	770 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	ZDHHC14	Q8IZN3	488 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	CMTM8	Q8IZV2	173 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	RIN3	Q8TB24	985 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	MSLNL	Q96KJ4	702 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	TASP1	Q9H6P5	420 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	L2HGDH	Q9H9P8	463 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	HS3ST4	Q9Y661	456 aa		18.39	■□□□□ 0.53
SPIN3-238	ENST00000640421	hCG_1818297	A0A087WSY0	165 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	ZNF197	O14709	1029 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	SCAMP3	O14828	347 aa	Known RBP	18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	PRAMEF12	O95522	483 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	FGG	P02679	453 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	GOT1	P17174	413 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	KPNA1	P52294	538 aa	Predicted RBP	18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	KRT81	Q14533	505 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	SEL1L2	Q5TEA6	688 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	HAPLN3	Q96S86	360 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	CDX2	Q99626	313 aa	Predicted RBP	18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	OSBPL8	Q9BZF1	889 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	SIK2	Q9H0K1	926 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	ADAM7	Q9H2U9	754 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	SLITRK6	Q9H5Y7	841 aa		18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	CWC15	Q9P013	229 aa	Known RBP	18.38	■□□□□ 0.53
SPIN3-238	ENST00000640421	OR12D3	Q9UGF7	316 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms