RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 HOXD12P35452 270 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 RFX2P48378 723 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 ASPHD1Q5U4P2 390 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 MANEALQ5VSG8 457 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 PLAG1Q6DJT9 500 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 MAEAQ7L5Y9 396 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 SRGAP1Q7Z6B7 1085 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 ZBTB34Q8NCN2 500 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 AKAP1Q92667 903 aaKnown RBP eCLIP4.06□□□□□ -1.76
AP3S1-209ENST00000640413 KAT2BQ92831 832 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 PHF21BQ96EK2 531 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 WDR83Q9BRX9 315 aaKnown RBP4.06□□□□□ -1.76
AP3S1-209ENST00000640413 B3GNT5Q9BYG0 378 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 SEZ6LQ9BYH1 1024 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 FAM83DQ9H4H8 585 aa4.06□□□□□ -1.76
AP3S1-209ENST00000640413 IPO11Q9UI26 975 aaKnown RBP4.06□□□□□ -1.76
AP3S1-209ENST00000640413 NOTCH3Q9UM47 2321 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 COL15A1P39059 1388 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 HOXC6P09630 235 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 TXNP10599 105 aaKnown RBP4.05□□□□□ -1.76
AP3S1-209ENST00000640413 BRAFP15056 766 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 HSPA6P17066 643 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 BTF3P20290 206 aaKnown RBP4.05□□□□□ -1.76
AP3S1-209ENST00000640413 NDUFS1P28331 727 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 RPS16P62249 146 aaKnown RBP4.05□□□□□ -1.76
AP3S1-209ENST00000640413 IGBP1P78318 339 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 AASDHQ4L235 1098 aaPredicted RBP4.05□□□□□ -1.76
AP3S1-209ENST00000640413 PRSS57Q6UWY2 283 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 RHPN2Q8IUC4 686 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 SLC35G2Q8TBE7 412 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 GJA10Q969M2 543 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 NMD3Q96D46 503 aaKnown RBP4.05□□□□□ -1.76
AP3S1-209ENST00000640413 ELOVL1Q9BW60 279 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 C22orf23Q9BZE7 217 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 CHST8Q9H2A9 424 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 NMRK2Q9NPI5 230 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 SIRT3Q9NTG7 399 aaPredicted RBP4.05□□□□□ -1.76
AP3S1-209ENST00000640413 HPSEQ9Y251 543 aa4.05□□□□□ -1.76
AP3S1-209ENST00000640413 TTC34A8MYJ7 566 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 MARCH6O60337 910 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 LDB3O75112 727 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 SOCS5O75159 536 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 ALDH1L1O75891 902 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 TUSC2O75896 110 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 MAP4K4O95819 1239 aaPredicted RBP4.04□□□□□ -1.76
AP3S1-209ENST00000640413 TCEA1P23193 301 aaKnown RBP4.04□□□□□ -1.76
AP3S1-209ENST00000640413 DUSP1P28562 367 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 PBX1P40424 430 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 PCYT1AP49585 367 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 ZNF84P51523 738 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 ERVFC1-1P60608 527 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 WASHC2DQ5SRD0 308 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 LIPMQ5VYY2 423 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 DHRS13Q6UX07 377 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 CTU1Q7Z7A3 348 aaKnown RBP4.04□□□□□ -1.76
AP3S1-209ENST00000640413 YAF2Q8IY57 180 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 PRR26Q8N8Z3 221 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 ZDHHC12Q96GR4 267 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 TAAR9Q96RI9 348 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 HTATIP2Q9BUP3 242 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 SELENOOQ9BVL4 669 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 TM6SF1Q9BZW5 370 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 ZNF556Q9HAH1 456 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 AFF4Q9UHB7 1163 aaKnown RBP4.04□□□□□ -1.76
AP3S1-209ENST00000640413 ITGB1BP2Q9UKP3 347 aa4.04□□□□□ -1.76
AP3S1-209ENST00000640413 CGAP01215 116 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 IFNA2P01563 188 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 WNT1P04628 370 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 SLC3A2P08195 630 aaKnown RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 PKMP14618 531 aaKnown RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 CPA1P15085 419 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 PDLIM4P50479 330 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 CRYZQ08257 329 aaKnown RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 TTF1Q15361 905 aaPredicted RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 KRTAP24-1Q3LI83 254 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 FAM76BQ5HYJ3 339 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 HMBOX1Q6NT76 420 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 OVCH2Q7RTZ1 564 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 DDIASQ8IXT1 998 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 C7orf57Q8NEG2 295 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 SUN3Q8TAQ9 357 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 CENPIQ92674 756 aaPredicted RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 RNF26Q9BY78 433 aaPredicted RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 ISCUQ9H1K1 167 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 TYW1Q9NV66 732 aaKnown RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 DDX56Q9NY93 547 aaKnown RBP4.03□□□□□ -1.76
AP3S1-209ENST00000640413 COL20A1Q9P218 1284 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 LAMP3Q9UQV4 416 aa4.03□□□□□ -1.76
AP3S1-209ENST00000640413 A0A1B0GUV1 79 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 CFAP69A5D8W1 941 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 PDGFRBP09619 1106 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 AKR1A1P14550 325 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 CIITAP33076 1130 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 ART1P52961 327 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 PIN1Q13526 163 aaPredicted RBP4.02□□□□□ -1.77
AP3S1-209ENST00000640413 KCNJ12Q14500 433 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 ACOX1Q15067 660 aa4.02□□□□□ -1.77
AP3S1-209ENST00000640413 MZT2AQ6P582 158 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms