RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 KLHDC7AQ5VTJ3 777 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 TRMT10BQ6PF06 316 aaKnown RBP6.48□□□□□ -1.37
ATM-229ENST00000639953 FOXR2Q6PJQ5 311 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 TSHZ1Q6ZSZ6 1077 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 USP53Q70EK8 1073 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 OTUD6AQ7L8S5 288 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 CNGA4Q8IV77 575 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 KBTBD2Q8IY47 623 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 NME8Q8N427 588 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 CELF2-AS1Q8N7Q2 184 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 NOA1Q8NC60 698 aaKnown RBP6.48□□□□□ -1.37
ATM-229ENST00000639953 ERMNQ8TAM6 284 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 LMO3Q8TAP4 145 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 NEK9Q8TD19 979 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 KCTD13Q8WZ19 329 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 KAT5Q92993 513 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 DVL3Q92997 716 aaPredicted RBP6.48□□□□□ -1.37
ATM-229ENST00000639953 SLC35C1Q96A29 364 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 CCDC34Q96HJ3 373 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 MMS19Q96T76 1030 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 NAA15Q9BXJ9 866 aaKnown RBP6.48□□□□□ -1.37
ATM-229ENST00000639953 IFIH1Q9BYX4 1025 aaKnown RBP6.48□□□□□ -1.37
ATM-229ENST00000639953 RAB34Q9BZG1 259 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 HAPLN2Q9GZV7 340 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 PCIF1Q9H4Z3 704 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 SLC6A20Q9NP91 592 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 SUCLA2Q9P2R7 463 aaPredicted RBP6.48□□□□□ -1.37
ATM-229ENST00000639953 GUCA1BQ9UMX6 200 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 NOC2LQ9Y3T9 749 aaKnown RBP6.48□□□□□ -1.37
ATM-229ENST00000639953 PCDHA13Q9Y5I0 950 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 SLC4A7Q9Y6M7 1214 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 ADGRA3Q8IWK6 1321 aa6.48□□□□□ -1.37
ATM-229ENST00000639953 A0A087WZ62 844 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 A0A087X0T9 212 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 GOLGA8IPA6NC78 632 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 GOLGA8JA6NMD2 632 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 EIF3CLB5ME19 914 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 PDXKO00764 312 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 MGEA5O60502 916 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 LYPLA2O95372 231 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 PARNO95453 639 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 LTFP02788 710 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 PFKMP08237 780 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 FAM228BP0C875 321 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 ATP2A2P16615 1042 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 IBSPP21815 317 aaPredicted RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 NR2F2P24468 414 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 TMOD1P28289 359 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 ADSSP30520 456 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 CYP2J2P51589 502 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 GPC3P51654 580 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 CDK17Q00537 523 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 PPP3CAQ08209 521 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 EMC2Q15006 297 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 EDRF1Q3B7T1 1238 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 LRIT3Q3SXY7 679 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 HAUS3Q68CZ6 603 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 KCNT2Q6UVM3 1135 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 Q7L0L9 218 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 ZNF571Q7Z3V5 609 aaPredicted RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 RTN4RL1Q86UN2 441 aaPredicted RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 FAM228AQ86W67 206 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 RHPN2Q8IUC4 686 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 ARHGEF19Q8IW93 802 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 SLC16A11Q8NCK7 471 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 NUDT10Q8NFP7 164 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 LNX1Q8TBB1 728 aaPredicted RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 HNRNPLLQ8WVV9 542 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 PRPF31Q8WWY3 499 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 SEMA4DQ92854 862 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 CCDC47Q96A33 483 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 JAKMIP2Q96AA8 810 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 NUDT11Q96G61 164 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 NLRP4Q96MN2 994 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 CCDC43Q96MW1 224 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 SCLT1Q96NL6 688 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 MAP7D2Q96T17 732 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 PNKPQ96T60 521 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 EIF3CQ99613 913 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 TSG101Q99816 390 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 FDXACB1Q9BRP7 624 aaPredicted RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 CBWD1Q9BRT8 395 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 SYT11Q9BT88 431 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 LRRC27Q9C0I9 530 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 DHX33Q9H6R0 707 aaKnown RBP6.47□□□□□ -1.37
ATM-229ENST00000639953 ANKZF1Q9H8Y5 726 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 ERVK-5Q9HDB9 667 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 AGPAT3Q9NRZ7 376 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 ANKEF1Q9NU02 776 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 PADI3Q9ULW8 664 aa6.47□□□□□ -1.37
ATM-229ENST00000639953 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.46□□□□□ -1.38
ATM-229ENST00000639953 ABHD14A-ACY1A0A1B0GW23 586 aa6.46□□□□□ -1.38
ATM-229ENST00000639953 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.46□□□□□ -1.38
ATM-229ENST00000639953 LCHNA4D1U4 455 aa6.46□□□□□ -1.38
ATM-229ENST00000639953 ARHGEF35A5YM69 484 aa6.46□□□□□ -1.38
ATM-229ENST00000639953 ENPP3O14638 875 aa6.46□□□□□ -1.38
ATM-229ENST00000639953 SLC16A4O15374 487 aa6.46□□□□□ -1.38
ATM-229ENST00000639953 SRGAP2CP0DJJ0 459 aa6.46□□□□□ -1.38
ATM-229ENST00000639953 KIF11P52732 1056 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms