RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 IPPQ9Y573 584 aa1.06□□□□□ -2.24
LMBR1-222ENST00000638959 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.05□□□□□ -2.24
LMBR1-222ENST00000638959 CCDC154A6NI56 674 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 KRTAP16-1A8MUX0 517 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 RHODO00212 210 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 PRAMEF2O60811 474 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 KCNJ13O60928 360 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 ATP2B1P20020 1258 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 PRKAR1BP31321 381 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 GTF2F1P35269 517 aaKnown RBP eCLIP1.05□□□□□ -2.24
LMBR1-222ENST00000638959 VPS41P49754 854 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 EXOSC9Q06265 439 aaKnown RBP1.05□□□□□ -2.24
LMBR1-222ENST00000638959 GRIK2Q13002 908 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 TRAF3Q13114 568 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 CCNIQ14094 377 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 TCTE1Q5JU00 501 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 SWSAP1Q6NVH7 229 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 SLC16A12Q6ZSM3 486 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 SKAP1Q86WV1 359 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 GPSM1Q86YR5 675 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 DHX37Q8IY37 1157 aaKnown RBP1.05□□□□□ -2.24
LMBR1-222ENST00000638959 NIM1KQ8IY84 436 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 SPARTQ8N0X7 666 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 FBXL16Q8N461 479 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 MAB21L3Q8N8X9 362 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 GABPB2Q8TAK5 448 aaPredicted RBP1.05□□□□□ -2.24
LMBR1-222ENST00000638959 BPIFB1Q8TDL5 484 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 NINJ1Q92982 152 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 USP13Q92995 863 aaPredicted RBP1.05□□□□□ -2.24
LMBR1-222ENST00000638959 MKL1Q969V6 931 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 ZNF501Q96CX3 271 aaPredicted RBP1.05□□□□□ -2.24
LMBR1-222ENST00000638959 P2RY11Q96G91 374 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 TTLL2Q9BWV7 592 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 WDCPQ9H6R7 721 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 CATSPERBQ9H7T0 1116 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 KANSL2Q9H9L4 492 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 ABCF2Q9UG63 623 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 LAMP3Q9UQV4 416 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 SPATA31A1Q5TZJ5 1347 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 ZNF318Q5VUA4 2279 aa1.05□□□□□ -2.24
LMBR1-222ENST00000638959 LIASO43766 372 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 FGF17O60258 216 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 ZEB2O60315 1214 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 SRSF10O75494 262 aaKnown RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 ADRA1DP25100 572 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 EPHA3P29320 983 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 IARSP41252 1262 aaKnown RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 PMS2P54278 862 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 BCAT1P54687 386 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 CCDC15Q0P6D6 951 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 PTCHD3Q3KNS1 767 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 DCAF12L2Q5VW00 463 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 FAM198BQ6UWH4 519 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 SLC26A9Q7LBE3 791 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 PPP1R3BQ86XI6 285 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 PAQR4Q8N4S7 273 aaPredicted RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 SRBD1Q8N5C6 995 aaKnown RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 DNAJC5GQ8N7S2 189 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 ARL14EPQ8N8R7 260 aaPredicted RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 C3orf20Q8ND61 904 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 DEPTORQ8TB45 409 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 GRAPLQ8TC17 118 aaPredicted RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 PPP2R3CQ969Q6 453 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 RUNDC1Q96C34 613 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 AHCYL2Q96HN2 611 aaKnown RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 FEM1CQ96JP0 617 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 OSBPL2Q9H1P3 480 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 PELI2Q9HAT8 420 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 TUBD1Q9UJT1 453 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 MED16Q9Y2X0 877 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 PCDHA3Q9Y5H8 950 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 CFAP20Q9Y6A4 193 aaKnown RBP1.04□□□□□ -2.24
LMBR1-222ENST00000638959 ZHX2Q9Y6X8 837 aa1.04□□□□□ -2.24
LMBR1-222ENST00000638959 LINC01553A4QN01 128 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 TULP2O00295 520 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 EXOC5O00471 708 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 VWA5AO00534 786 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 NDUFS2O75306 463 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 EDNRBP24530 442 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 GALNSP34059 522 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 SOX2P48431 317 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 HLCSP50747 726 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 MFAP1P55081 439 aaKnown RBP1.03□□□□□ -2.24
LMBR1-222ENST00000638959 TIRAPP58753 221 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 CLUL1Q15846 466 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 LIPMQ5VYY2 423 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 LRIG3Q6UXM1 1119 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 AMOTL1Q8IY63 956 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 AMER3Q8N944 861 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 ADAD2Q8NCV1 583 aaKnown RBP1.03□□□□□ -2.24
LMBR1-222ENST00000638959 DNAJB14Q8TBM8 379 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 MESP1Q9BRJ9 268 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 CINPQ9BW66 212 aaPredicted RBP1.03□□□□□ -2.24
LMBR1-222ENST00000638959 WDR13Q9H1Z4 485 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 ZNF334Q9HCZ1 680 aaPredicted RBP1.03□□□□□ -2.24
LMBR1-222ENST00000638959 SEMA5BQ9P283 1151 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 POLHQ9Y253 713 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 TMX2Q9Y320 296 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 RNF215Q9Y6U7 377 aa1.03□□□□□ -2.24
LMBR1-222ENST00000638959 AGRNO00468 2067 aa1.03□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms