RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 CSF2RAP15509 400 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 AMPD1P23109 780 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 IVDP26440 423 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 RBL1P28749 1068 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 ELF1P32519 619 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 RPL22P35268 128 aaKnown RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 ALDH1A3P47895 512 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 GLUD2P49448 558 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 LBX1P52954 281 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 AP1B1Q10567 949 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 SLC29A2Q14542 456 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 PPP2R5DQ14738 602 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 VEPH1Q14D04 833 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 PAFAH1B3Q15102 231 aaKnown RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 UAP1Q16222 522 aaPredicted RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 HIF1AQ16665 826 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 DDR2Q16832 855 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 TCTN1Q2MV58 587 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 RTP2Q5QGT7 225 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 C6orf118Q5T5N4 469 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 RNASEH2BQ5TBB1 312 aaKnown RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 AGBL2Q5U5Z8 902 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 OTUD1Q5VV17 481 aaPredicted RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 NCBP2-AS2Q69YL0 99 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 SLC8B1Q6J4K2 584 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 FAM117BQ6P1L5 589 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 LRRC31Q6UY01 552 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 RNF19BQ6ZMZ0 732 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 BHLHA9Q7RTU4 235 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 RELL1Q8IUW5 271 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 UNC45BQ8IWX7 931 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 PDIK1LQ8N165 341 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 VPS52Q8N1B4 723 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 ATP6V0D2Q8N8Y2 350 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 CCNYQ8ND76 341 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 SCAMP5Q8TAC9 235 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 PIK3R5Q8WYR1 880 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 IGSF21Q96ID5 467 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 B3GALT6Q96L58 329 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 ATP6V1G3Q96LB4 118 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 RBM15Q96T37 977 aaKnown RBP eCLIP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 HERC2P3Q9BVR0 1158 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 TXLNGYQ9BZA5 131 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 ROPN1BQ9BZX4 212 aaPredicted RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 NACA2Q9H009 215 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 CDC42EP4Q9H3Q1 356 aaKnown RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 CWH43Q9H720 699 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 ROPN1Q9HAT0 212 aaPredicted RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 WDR6Q9NNW5 1121 aaKnown RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 SAYSD1Q9NPB0 183 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 IL23AQ9NPF7 189 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 ARHGEF4Q9NR80 690 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 TMEM30AQ9NV96 361 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 MTMR10Q9NXD2 777 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 CLIC5Q9NZA1 410 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 SPG21Q9NZD8 308 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 HSFX1Q9UBD0 423 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 XPO7Q9UIA9 1087 aaKnown RBP6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 MAFFQ9ULX9 164 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 TLR6Q9Y2C9 796 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 PCDHB12Q9Y5F1 795 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 CDY1Q9Y6F8 540 aa6.51□□□□□ -1.37
CACNA1D-227ENST00000637844 VWA8A3KMH1 1905 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 A0A087WUV0 522 aaPredicted RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 C5orf60A6NFR6 353 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 SLC38A8A6NNN8 435 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 C2CD2LO14523 706 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 RGS16O15492 202 aaPredicted RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 GCATO75600 419 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 TTC4O95801 387 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 IGLV3-25P01717 112 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 ABHD2P08910 425 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 TSHRP16473 764 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 ERCC2P18074 760 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 EPHB2P29323 1055 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 OR1D2P34982 312 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 CA8P35219 290 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 CHKAP35790 457 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 FDFT1P37268 417 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 PBX3P40426 434 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 MAGEA4P43358 317 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 GDF10P55107 478 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 TBX4P57082 545 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 WDR5P61964 334 aaKnown RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 PITX1P78337 314 aaPredicted RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 GBE1Q04446 702 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 ZNF844Q08AG5 666 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 PDIA2Q13087 525 aaKnown RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 DUSP4Q13115 394 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 PLD1Q13393 1074 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 DPYSQ14117 519 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 STAT4Q14765 748 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 DNAJC21Q5F1R6 531 aaKnown RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 TPGS2Q68CL5 300 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 RWDD4Q6NW29 188 aaKnown RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 MSANTD2Q6P1R3 559 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 PRSS55Q6UWB4 352 aaPredicted RBP6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 TAOK1Q7L7X3 1001 aa6.5□□□□□ -1.37
CACNA1D-227ENST00000637844 PALM2Q8IXS6 379 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms