RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CCDC14Q49A88 953 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ZNF805Q5CZA5 627 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 BMP2KLQ5H9B9 411 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 C1orf185Q5T7R7 199 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 C12orf60Q5U649 245 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SHEQ5VZ18 495 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CES4AQ5XG92 561 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CREB3L3Q68CJ9 461 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 PDPK2PQ6A1A2 396 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TANGO2Q6ICL3 276 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ABHD17CQ6PCB6 329 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 AAGABQ6PD74 315 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 PAPD4Q6PIY7 484 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 SLC30A9Q6PML9 568 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 PAQR3Q6TCH7 311 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 MAEAQ7L5Y9 396 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 B3GNT8Q7Z7M8 397 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ADGRG6Q86SQ4 1221 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 DDX53Q86TM3 631 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 LUZP1Q86V48 1076 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 COMTD1Q86VU5 262 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 METTL23Q86XA0 190 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 KIAA2013Q8IYS2 634 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TTC5Q8N0Z6 440 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TAGAPQ8N103 731 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 FBXW8Q8N3Y1 598 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ZNF321PQ8N8H1 164 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CNNM3Q8NE01 707 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 KIF18AQ8NI77 898 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 FIBINQ8TAL6 211 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CCDC110Q8TBZ0 833 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 STT3BQ8TCJ2 826 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 MIPOL1Q8TD10 442 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 BCAS4Q8TDM0 211 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 KCNG4Q8TDN1 519 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ADAMTS17Q8TE56 1095 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SLC5A5Q92911 643 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 MUL1Q969V5 352 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SDCCAG3Q96C92 435 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ZNF653Q96CK0 615 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 C11orf24Q96F05 449 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 PDLIM5Q96HC4 596 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 RBM17Q96I25 401 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 GBP5Q96PP8 586 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CTAGE1Q96RT6 745 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SH3GL2Q99962 352 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SPZ1Q9BXG8 430 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TSGA10Q9BZW7 698 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 DPH5Q9H2P9 285 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 STN1Q9H668 368 aaKnown RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 HAUS4Q9H6D7 363 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 OPA3Q9H6K4 179 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 BCAS3Q9H6U6 928 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 PNPLA8Q9NP80 782 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 NRIP3Q9NQ35 241 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 POLE3Q9NRF9 147 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SNX15Q9NRS6 342 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CCM2LQ9NUG4 571 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 AP5S1Q9NUS5 200 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 UCKL1Q9NWZ5 548 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TUBA8Q9NY65 449 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 VPS18Q9P253 973 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 AMACRQ9UHK6 382 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ATPIF1Q9UII2 106 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SERPINB13Q9UIV8 391 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CROTQ9UKG9 612 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 TLK1Q9UKI8 766 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 SLC39A10Q9ULF5 831 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ZMYND8Q9ULU4 1186 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 TNFSF13BQ9Y275 285 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 ZKSCAN5Q9Y2L8 839 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 USP15Q9Y4E8 981 aaPredicted RBP3.16□□□□□ -1.9
VIM-210ENST00000637053 ATP6V1DQ9Y5K8 247 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 FAM169AQ9Y6X4 670 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 CGNL1Q0VF96 1302 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 KIF7Q2M1P5 1343 aa3.16□□□□□ -1.9
VIM-210ENST00000637053 A0A1W2PPC4 97 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 CCDC78A2IDD5 438 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 XKRY2A2RUG3 117 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 A4D1N5 150 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 BLACEA4D250 179 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 PMS2P1A4D2B8 440 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 OR6C74A6NCV1 312 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 AQP12BA6NM10 295 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 TTC34A8MYJ7 566 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.15□□□□□ -1.91
VIM-210ENST00000637053 PTGES3LE9PB15 166 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 GOLGA8SH3BPF8 625 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 NDUFS8O00217 210 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 KRIT1O00522 736 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 IFIT3O14879 490 aaKnown RBP3.15□□□□□ -1.91
VIM-210ENST00000637053 KIAA0355O15063 1070 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 VILLO15195 856 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 NVLO15381 856 aaKnown RBP3.15□□□□□ -1.91
VIM-210ENST00000637053 SRGAP3O43295 1099 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 BUB1O43683 1085 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 SIGLEC6O43699 453 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 SULT1B1O43704 296 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 TBC1D4O60343 1298 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 CIDEAO60543 219 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms