RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SYTL1Q8IYJ3 562 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 CELF5Q8N6W0 485 aaKnown RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ATP11CQ8NB49 1132 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 TNPO1Q92973 898 aaKnown RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 TRIM43Q96BQ3 446 aaPredicted RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 P2RX7Q99572 595 aaKnown RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ISCA1Q9BUE6 129 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 C1orf43Q9BWL3 253 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 TTLL2Q9BWV7 592 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 SERHLQ9NQF3 203 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 RLIMQ9NVW2 624 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ELOVL5Q9NYP7 299 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 VSX1Q9NZR4 365 aaPredicted RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 FAM30AQ9NZY2 134 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 MYO1AQ9UBC5 1043 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 SERGEFQ9UGK8 458 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 SLC23A1Q9UHI7 598 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 DGKBQ9Y6T7 804 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 A0A1B0GUL6 1792 aa2.9□□□□□ -1.94
SMARCB1-208ENST00000634926 PAPPA2Q9BXP8 1791 aa2.9□□□□□ -1.94
SMARCB1-208ENST00000634926 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PRSS29PA6NIE9 313 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 LINC00473A8K010 186 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ADM5C9JUS6 153 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 BTN3A1O00481 513 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 GRM6O15303 877 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 INSIG1O15503 277 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 FFAR2O15552 330 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PJA2O43164 708 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 TBC1D4O60343 1298 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 EIF5BO60841 1220 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC43A1O75387 559 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ANXA2P07355 339 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SBK3P0C264 359 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 NHLRC4P0CG21 123 aaPredicted RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 HSPA1AP0DMV8 641 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 HSPA1BP0DMV9 641 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SRGNP10124 158 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 HARSP12081 509 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 HSD3B1P14060 373 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 VEGFAP15692 232 aaPredicted RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 FGFR2P21802 821 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 CHKAP35790 457 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 GRIA3P42263 894 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 TNNT2P45379 298 aaPredicted RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 RPS16P62249 146 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 EXOSC9Q06265 439 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC13A2Q13183 592 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC39A6Q13433 755 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 BIRC3Q13489 604 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 BLMHQ13867 455 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 HABP2Q14520 560 aaPredicted RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PUM3Q15397 648 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 MPEG1Q2M385 716 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC35G1Q2M3R5 365 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 KRTAP27-1Q3LI81 207 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC44A4Q53GD3 710 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 CCDC93Q567U6 631 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 C3orf38Q5JPI3 329 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 C1orf141Q5JVX7 400 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 KLHDC7AQ5VTJ3 777 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 MORN5Q5VZ52 161 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 TBC1D9BQ66K14 1250 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 KAZNQ674X7 775 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 VWA1Q6PCB0 445 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF790Q6PG37 636 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 TMED8Q6PL24 325 aaPredicted RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC2A7Q6PXP3 512 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 LDHAL6AQ6ZMR3 332 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 USP43Q70EL4 1123 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 BEND5Q7L4P6 421 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 YTHDF3Q7Z739 585 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 NEK8Q86SG6 692 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 MICU3Q86XE3 530 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PDSS2Q86YH6 399 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ZDHHC17Q8IUH5 632 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 RBMXL3Q8N7X1 1067 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF527Q8NB42 609 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 IL17REQ8NFR9 667 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 NLGN4YQ8NFZ3 816 aaPredicted RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 CCT6BQ92526 530 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 MAML1Q92585 1016 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 MARS2Q96GW9 593 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SNX22Q96L94 193 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 NAP1L4Q99733 375 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 EIF2AQ9BY44 585 aaKnown RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF518BQ9C0D4 1074 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 MYLK2Q9H1R3 596 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 RNPEPQ9H4A4 650 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 BRD9Q9H8M2 597 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SMURF2Q9HAU4 748 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PRDM16Q9HAZ2 1276 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 SACM1LQ9NTJ5 587 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 FBXO34Q9NWN3 711 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 JKAMPQ9P055 326 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 CFAP97Q9P2B7 532 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF69Q9UC07 566 aa2.9□□□□□ -1.95
SMARCB1-208ENST00000634926 PGAP2Q9UHJ9 254 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms