RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	NTRK1	P04629	796 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	HSD17B4	P51659	736 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	TTLL4	Q14679	1199 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	PREPL	Q4J6C6	727 aa	Predicted RBP	11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	RBM44	Q6ZP01	1051 aa	Known RBP	11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	C3orf62	Q6ZUJ4	267 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	IPMK	Q8NFU5	416 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	UBA3	Q8TBC4	463 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	KRT35	Q92764	455 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	CELF1	Q92879	486 aa	Known RBP	11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZNF350	Q9GZX5	532 aa		11.63	□□□□□ -0.55
SRSF4-208	ENST00000634348	PRH1	P02810	166 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	STIP1	P31948	543 aa	Known RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PPM1L	Q5SGD2	360 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	FAXC	Q5TGI0	409 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	HPS6	Q86YV9	775 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	AGPAT1	Q99943	283 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	CLIC5	Q9NZA1	410 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	MINPP1	Q9UNW1	487 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZNF24	P17028	368 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PPP2R1B	P30154	601 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	KCNA10	Q16322	511 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	FAM76B	Q5HYJ3	339 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	C6orf183	Q5T699	404 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	MROH9	Q5TGP6	573 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	SHC4	Q6S5L8	630 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	LRRC69	Q6ZNQ3	347 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZNF614	Q8N883	585 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	FAR1	Q8WVX9	515 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZHX1-C8orf76	Q96EF9	292 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	SEPT5	Q99719	369 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PCDH18	Q9HCL0	1135 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	NMRK1	Q9NWW6	199 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	SIK3	Q9Y2K2	1263 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	hCG_1984214	I3L0E3	225 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	WEE2	P0C1S8	567 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	CDK17	Q00537	523 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZBTB6	Q15916	424 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PROM2	Q8N271	834 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZNF713	Q8N859	430 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	SLC4A9	Q96Q91	983 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	VPS35	Q96QK1	796 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	GNPTG	Q9UJJ9	305 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	GNAO1	P09471	354 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PDGFRA	P16234	1089 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	DDX39B	Q13838	428 aa	Known RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ARMC6	Q6NXE6	501 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	LRRC70	Q7Z2Q7	622 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	SAPCD2	Q86UD0	394 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	COL23A1	Q86Y22	540 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ZNF655	Q8N720	491 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	C2orf69	Q8N8R5	385 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PCDH19	Q8TAB3	1148 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PRCC	Q92733	491 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	NACC2	Q96BF6	587 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	VPS33B	Q9H267	617 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	KDM5A	P29375	1690 aa	Known RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	KATNA1	O75449	491 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	ENDOD1	O94919	500 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	LDLR	P01130	860 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	P4HB	P07237	508 aa	Known RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	VEPH1	Q14D04	833 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	TDRD5	Q8NAT2	981 aa	Known RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	C18orf8	Q96DM3	657 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	TRIM62	Q9BVG3	475 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	EHD4	Q9H223	541 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	CNP	P09543	421 aa	Known RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	THRB	P10828	461 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	YAF2	Q8IY57	180 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	MED11	Q9P086	117 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	SNX7	Q9UNH6	387 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	DMTF1	Q9Y222	760 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	HEATR9	A2RTY3	570 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	FAM172BP	A6NC97	362 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	CD3EAP	O15446	510 aa	Known RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	PHC1	P78364	1004 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	OVGP1	Q12889	678 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	STK32A	Q8WU08	396 aa		11.62	□□□□□ -0.55
SRSF4-208	ENST00000634348	MAFK	O60675	156 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	CHRNG	P07510	517 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	PTPN7	P35236	360 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	ARL4D	P49703	201 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	AP3S2	P59780	193 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	RAD51	Q06609	339 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	C12orf66	Q96MD2	445 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	COA1	Q9GZY4	146 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	CCDC86	Q9H6F5	360 aa	Known RBP	11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	KIAA1586	Q9HCI6	787 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	SNX12	Q9UMY4	172 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	NCF1B	A6NI72	391 aa	Predicted RBP	11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	NCF1C	A8MVU1	366 aa	Predicted RBP	11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348		M0R036	132 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	TADA2A	O75478	443 aa		11.61	□□□□□ -0.55
SRSF4-208	ENST00000634348	IFI30	P13284	250 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms