RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 FBXO32Q969P5 355 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 MAGEB10Q96LZ2 347 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 VANGL2Q9ULK5 521 aa13.51□□□□□ -0.25
SYNGAP1-208ENST00000629380 TOB2Q14106 344 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 FAM120BQ96EK7 910 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 AIFM3Q96NN9 605 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 DSN1Q9H410 356 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 SSNA1O43805 119 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 SRGNP10124 158 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 GRIK3Q13003 919 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 SGMS1Q86VZ5 419 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 FAM228AQ86W67 206 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 RERGLQ9H628 205 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NEURL4Q96JN8 1562 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 PTPN3P26045 913 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 RPL10AP62906 217 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 LAYNQ6UX15 382 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCDC36Q8IYA8 594 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 FEZF2Q8TBJ5 459 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 TMC2Q8TDI7 906 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 UBE2E3Q969T4 207 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 DLG5Q8TDM6 1919 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NCF1BA6NI72 391 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NCF1CA8MVU1 366 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NCF1P14598 390 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NFYCQ13952 458 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NECTIN1Q15223 517 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 AHCYL2Q96HN2 611 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 ROGDIQ9GZN7 287 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 MROH8Q9H579 483 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 VPS28Q9UK41 221 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 KIAA1257Q9ULG3 409 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 SUPT20HL2P0C7V6 817 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 TFE3P19532 575 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 GALCP54803 685 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 COPZ1P61923 177 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NAB1Q13506 487 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 REEP2Q9BRK0 252 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NOD2Q9HC29 1040 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 A0A087WZ62 844 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 CAMK1Q14012 370 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 USP38Q8NB14 1042 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 COLEC11Q9BWP8 271 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 DEFB129Q9H1M3 183 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 TTC3P53804 2025 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NQO1P15559 274 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 IL2P60568 153 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 LPCAT2Q7L5N7 544 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 TMEM143Q96AN5 459 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 PHF11Q9UIL8 331 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 H3BN98 237 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 RAD51BO15315 384 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 FKBP6O75344 327 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 OR6B1O95007 311 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 LGALS3BPQ08380 585 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 CYP20A1Q6UW02 462 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 SLC44A2Q8IWA5 706 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 TRPC4APQ8TEL6 797 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 NSUN4Q96CB9 384 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 FAM111AQ96PZ2 611 aa13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 METTL5Q9NRN9 209 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-208ENST00000629380 FASP25445 335 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 SBK1Q52WX2 424 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 RPTNQ6XPR3 784 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZNF605Q86T29 641 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 MCOLN3Q8TDD5 553 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 MIEF2Q96C03 454 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 DSG3P32926 999 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 NAA20P61599 178 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 SCAIQ8N9R8 606 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 GPRASP2Q96D09 838 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 TMEM169Q96HH4 297 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 SLC40A1Q9NP59 571 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 PPIL2Q13356 520 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 PACS1Q6VY07 963 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 BNIPLQ7Z465 357 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 FMN2Q9NZ56 1722 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 NUDT14O95848 222 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 LMBRD2Q68DH5 695 aaPredicted RBP13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 MNTQ99583 582 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 ACTR8Q9H981 624 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 FAM92AA1XBS5 289 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCDC154A6NI56 674 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 HOXB6P17509 224 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 IL5RAQ01344 420 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 TRAF3Q13114 568 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 DYTNA2CJ06 578 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 OPLAHO14841 1288 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 NMT2O60551 498 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms