RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 LSM7Q9UK45 103 aaKnown RBP14.94□□□□□ -0.02
CDK7-215ENST00000629350 PCDH15Q96QU1 1955 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.93□□□□□ -0.02
CDK7-215ENST00000629350 TCRBV21S2A2A0A5A6 115 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 FAM170AA1A519 330 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 DCDC2BA2VCK2 349 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 TBC1D3BA6NDS4 549 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 WASH3PC4AMC7 463 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 PAEPP09466 180 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 SETSIPP0DME0 302 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 RALAP11233 206 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 GABRG2P18507 467 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 TNFRSF4P43489 277 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 GCNT1Q02742 428 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 CSRP2Q16527 193 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 BSPRYQ5W0U4 402 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 TMEM215Q68D42 235 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 FMNL3Q8IVF7 1028 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 WFDC5Q8TCV5 224 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 SORCS1Q8WY21 1168 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 KCTD13Q8WZ19 329 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 ZC3H10Q96K80 434 aaKnown RBP14.93□□□□□ -0.02
CDK7-215ENST00000629350 FAM124BQ9H5Z6 455 aaPredicted RBP14.93□□□□□ -0.02
CDK7-215ENST00000629350 EVA1BQ9NVM1 165 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 CACNA2D2Q9NY47 1150 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 FBXO10Q9UK96 956 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 CNTN6Q9UQ52 1028 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.93□□□□□ -0.02
CDK7-215ENST00000629350 ACACBO00763 2458 aa14.93□□□□□ -0.02
CDK7-215ENST00000629350 TPRP12270 2363 aaKnown RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 PATE3B3GLJ2 98 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 TSPAN3O60637 253 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 TRIM21P19474 475 aaKnown RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 MPLP40238 635 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 PPP1R2P41236 205 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 MFAP3P55082 362 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 PITX1P78337 314 aaPredicted RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 LMNB2Q03252 620 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 TRIP4Q15650 581 aaPredicted RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 MAP7D1Q3KQU3 841 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 BTBD8Q5XKL5 378 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 PMS2CLQ68D20 193 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 TRIM65Q6PJ69 517 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 RSRC2Q7L4I2 434 aaKnown RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 DGLUCYQ7Z3D6 616 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 FAM217AQ8IXS0 508 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 TRIML1Q8N9V2 468 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 MIS12Q9H081 205 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 LRRC4Q9HBW1 653 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 HESX1Q9UBX0 185 aa14.92□□□□□ -0.02
CDK7-215ENST00000629350 MAP1BP46821 2468 aaKnown RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 ASCC3Q8N3C0 2202 aaKnown RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 ATXN2Q99700 1313 aaKnown RBP14.92□□□□□ -0.02
CDK7-215ENST00000629350 USP24Q9UPU5 2620 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 GOLGA6L7A0A1B0GV03 622 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 P4HA2O15460 535 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 F12P00748 615 aaPredicted RBP14.91□□□□□ -0.02
CDK7-215ENST00000629350 KRT5P13647 590 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 HOXB2P14652 356 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 HOXD9P28356 352 aaPredicted RBP14.91□□□□□ -0.02
CDK7-215ENST00000629350 SLC6A4P31645 630 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 GBP1P32455 592 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 P2RY2P41231 377 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 PTGER3P43115 390 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 DGKGP49619 791 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 YWHAEP62258 255 aaKnown RBP14.91□□□□□ -0.02
CDK7-215ENST00000629350 CNGA2Q16280 664 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 NADSYN1Q6IA69 706 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 MSANTD2Q6P1R3 559 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 ARMCX6Q7L4S7 300 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 SIX6OS1Q8N1H7 587 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 EXOC4Q96A65 974 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 UBE2TQ9NPD8 197 aaPredicted RBP14.91□□□□□ -0.02
CDK7-215ENST00000629350 CALCOCO1Q9P1Z2 691 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 WDFY3Q8IZQ1 3526 aa14.91□□□□□ -0.02
CDK7-215ENST00000629350 ASPMQ8IZT6 3477 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 LRP3O75074 770 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 IGLV3-27P01718 113 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 GPD2P43304 727 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 GOLGA8FQ08AF8 430 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 GOLGA8DPQ0D2H9 430 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 PUM1Q14671 1186 aaKnown RBP eCLIP14.9□□□□□ -0.02
CDK7-215ENST00000629350 TAF5Q15542 800 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 FAM133BQ5BKY9 247 aaKnown RBP14.9□□□□□ -0.02
CDK7-215ENST00000629350 MIIPQ5JXC2 388 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 RFWD3Q6PCD5 774 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 LIAT1Q6ZQX7 453 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 DEFB119Q8N690 84 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 ADAM32Q8TC27 787 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 PRICKLE1Q96MT3 831 aaPredicted RBP14.9□□□□□ -0.02
CDK7-215ENST00000629350 IPO9Q96P70 1041 aaKnown RBP14.9□□□□□ -0.02
CDK7-215ENST00000629350 FSCN3Q9NQT6 498 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 CNGB3Q9NQW8 809 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 LMBRD1Q9NUN5 540 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 WDR35Q9P2L0 1181 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 XPO7Q9UIA9 1087 aaKnown RBP14.9□□□□□ -0.02
CDK7-215ENST00000629350 CDV3Q9UKY7 258 aaKnown RBP14.9□□□□□ -0.02
CDK7-215ENST00000629350 STARD13Q9Y3M8 1113 aa14.9□□□□□ -0.02
CDK7-215ENST00000629350 CACNA1EQ15878 2313 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms