RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 KCNT1Q5JUK3 1230 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 RABGAP1LQ5R372 815 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 TTC39BQ5VTQ0 682 aaPredicted RBP10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 SDHAF4Q5VUM1 108 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 CCDC137Q6PK04 289 aaKnown RBP10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 TMCO3Q6UWJ1 677 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 HFE2Q6ZVN8 426 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 BHLHA9Q7RTU4 235 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 GSTA5Q7RTV2 222 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 SCD5Q86SK9 330 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 TTC9BQ8N6N2 239 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 ZNF557Q8N988 423 aaPredicted RBP10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 CCDC89Q8N998 374 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 EIF1ADQ8N9N8 165 aaKnown RBP10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 AUTS2Q8WXX7 1259 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 ARNTL2Q8WYA1 636 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 LRRC45Q96CN5 670 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 MRPL38Q96DV4 380 aaKnown RBP10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 MS4A14Q96JA4 679 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 CCDC114Q96M63 670 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 RNF157Q96PX1 679 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 TSPYL1Q9H0U9 437 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 LRRC19Q9H756 370 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 SFXN1Q9H9B4 322 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 MAN1C1Q9NR34 630 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 PIGVQ9NUD9 493 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 ARHGEF38Q9NXL2 777 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 OR12D3Q9UGF7 316 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 PCYOX1Q9UHG3 505 aa10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 DRG1Q9Y295 367 aaKnown RBP10.51□□□□□ -0.73
FOXCUT-201ENST00000628509 GREB1Q4ZG55 1949 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 UQCRHLA0A096LP55 91 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 KCNU1A8MYU2 1149 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 HACD1B0YJ81 288 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 SMAPO00193 183 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 DYNC1I1O14576 645 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 FANCGO15287 622 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 GRM6O15303 877 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 CTIFO43310 598 aaKnown RBP10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 CREB3O43889 395 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 FYNP06241 537 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 UQCRHP07919 91 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 MBL2P11226 248 aaPredicted RBP10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 IL1R2P27930 398 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 MARCKSL1P49006 195 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 CALCOCO2Q13137 446 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 BYSLQ13895 437 aaKnown RBP10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 DPYSL3Q14195 570 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 PPP1R7Q15435 360 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 TAZQ16635 292 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 ANKRD20A8PQ5CZ79 823 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 DCAF12L1Q5VU92 463 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 TRNP1Q6NT89 227 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 MFSD7Q6UXD7 560 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 MIB1Q86YT6 1006 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 CDKL3Q8IVW4 592 aaPredicted RBP10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 KLHL7Q8IXQ5 586 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 ARFGAP1Q8N6T3 406 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 KIAA1958Q8N8K9 716 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 GPR152Q8TDT2 470 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 RAPGEF5Q92565 580 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 SLCO2A1Q92959 643 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 FAF2Q96CS3 445 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 TBC1D31Q96DN5 1066 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 PPP1R2P1Q96PQ5 205 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 KRT12Q99456 494 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 AP1M1Q9BXS5 423 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 CRISPLD1Q9H336 500 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 PCDH18Q9HCL0 1135 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 WDR6Q9NNW5 1121 aaKnown RBP10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 ZNF148Q9UQR1 794 aa10.5□□□□□ -0.73
FOXCUT-201ENST00000628509 HIDE1A8MVS5 230 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 GRXCR1A8MXD5 290 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 F5H5T6 163 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 PI4K2BG5E9Z4 385 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 CLASP2O75122 1294 aaKnown RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 SOAT2O75908 522 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 VNN2O95498 520 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 MYOGP15173 224 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 HMGA1P17096 107 aaKnown RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 HOXB8P17481 243 aaPredicted RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 HDCP19113 662 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 GABRR2P28476 465 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 EPHB2P29323 1055 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 CHKAP35790 457 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 AVPR1AP37288 418 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 ETFBP38117 255 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 RGS19P49795 217 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 OXCT1P55809 520 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 USP46P62068 366 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 CAV1Q03135 178 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 ZNF33AQ06730 810 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 C2orf54Q08AI8 447 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 MTMR3Q13615 1198 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 CUL1Q13616 776 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 PDK1Q15118 436 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 DUSP6Q16828 381 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 SH3PXD2AQ5TCZ1 1133 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 RFX8Q6ZV50 586 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms