RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 HLA-FP30511 346 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 CHKAP35790 457 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 PSEN1P49768 467 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 SGSHP51688 502 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 COG7P83436 770 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 STARD3Q14849 445 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 PTPRNQ16849 979 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 COL28A1Q2UY09 1125 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 PM20D1Q6GTS8 502 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 LAYNQ6UX15 382 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 ADIPOR2Q86V24 386 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 CEP57L1Q8IYX8 460 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 CPXM2Q8N436 756 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 CYB5D2Q8WUJ1 264 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 PRCCQ92733 491 aaPredicted RBP11.57□□□□□ -0.56
DDX41-218ENST00000625286 EEF2KMTQ96G04 330 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 BBC3Q96PG8 261 aaPredicted RBP11.57□□□□□ -0.56
DDX41-218ENST00000625286 ORAI3Q9BRQ5 295 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 UBXN6Q9BZV1 441 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 ZDHHC5Q9C0B5 715 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 TMEM245Q9H330 911 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 MMRN2Q9H8L6 949 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 TM7SF3Q9NS93 570 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 MARCH2Q9P0N8 246 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 KIAA1522Q9P206 1035 aaPredicted RBP11.57□□□□□ -0.56
DDX41-218ENST00000625286 ZNF510Q9Y2H8 683 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 FRMD4BQ9Y2L6 1034 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 NPC1O15118 1278 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 EPHX1P07099 455 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 ZNF883P0CG24 379 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 NR2F2P24468 414 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 RDXP35241 583 aaKnown RBP11.56□□□□□ -0.56
DDX41-218ENST00000625286 TKTL1P51854 596 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 ZNF132P52740 706 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 YWHAGP61981 247 aaKnown RBP eCLIP11.56□□□□□ -0.56
DDX41-218ENST00000625286 DPYDQ12882 1025 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 CAMK2BQ13554 666 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 CAMK2GQ13555 558 aaPredicted RBP11.56□□□□□ -0.56
DDX41-218ENST00000625286 ACAP1Q15027 740 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 TRIP4Q15650 581 aaPredicted RBP11.56□□□□□ -0.56
DDX41-218ENST00000625286 NFIL3Q16649 462 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 KIF19Q2TAC6 998 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 ZCWPW2Q504Y3 356 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 TMPRSS7Q7RTY8 843 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 ANKS1BQ7Z6G8 1248 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 KIAA0907Q7Z7F0 614 aaPredicted RBP11.56□□□□□ -0.56
DDX41-218ENST00000625286 WFDC5Q8TCV5 224 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 SETD7Q8WTS6 366 aaKnown RBP11.56□□□□□ -0.56
DDX41-218ENST00000625286 DDI1Q8WTU0 396 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 SNX21Q969T3 373 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 TMEM176AQ96HP8 235 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 DCLK3Q9C098 648 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 CIPCQ9C0C6 399 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 MTG2Q9H4K7 406 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 CISHQ9NSE2 258 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 SFMBT1Q9UHJ3 866 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 RAXQ9Y2V3 346 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 SNX11Q9Y5W9 270 aa11.56□□□□□ -0.56
DDX41-218ENST00000625286 CALUO43852 315 aaPredicted RBP11.55□□□□□ -0.56
DDX41-218ENST00000625286 SYNCRIPO60506 623 aaKnown RBP11.55□□□□□ -0.56
DDX41-218ENST00000625286 RHOBTB3O94955 611 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 CMA1P23946 247 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 OXTRP30559 389 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 MATKP42679 507 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 PDE4CQ08493 712 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 ARHGAP17Q68EM7 881 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
DDX41-218ENST00000625286 TADA2BQ86TJ2 420 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 PDZD3Q86UT5 571 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 FAM186BQ8IYM0 893 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 ANKRD52Q8NB46 1076 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 OR2T3Q8NH03 318 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 UCMAQ8WVF2 138 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 HNRNPLLQ8WVV9 542 aaKnown RBP11.55□□□□□ -0.56
DDX41-218ENST00000625286 MYEOVQ96EZ4 313 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 LMLNQ96KR4 655 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 SLC2A11Q9BYW1 496 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 ULBP1Q9BZM6 244 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 CCDC86Q9H6F5 360 aaKnown RBP11.55□□□□□ -0.56
DDX41-218ENST00000625286 TMEM8AQ9HCN3 771 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 PRSS16Q9NQE7 514 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 STOML2Q9UJZ1 356 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 APOBEC2Q9Y235 224 aaKnown RBP11.55□□□□□ -0.56
DDX41-218ENST00000625286 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.55□□□□□ -0.56
DDX41-218ENST00000625286 ZDHHC9Q9Y397 364 aa11.55□□□□□ -0.56
DDX41-218ENST00000625286 ARID1BQ8NFD5 2236 aaPredicted RBP11.54□□□□□ -0.56
DDX41-218ENST00000625286 HELZ2Q9BYK8 2649 aaKnown RBP11.54□□□□□ -0.56
DDX41-218ENST00000625286 FAM237AA0A1B0GTK4 181 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 GOLGA6L7A0A1B0GV03 622 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 YJEFN3A6XGL0 299 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 E7ENQ6 273 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 TIMM44O43615 452 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 ZBED1O96006 694 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 PSMC2P35998 433 aaKnown RBP11.54□□□□□ -0.56
DDX41-218ENST00000625286 NDUFA8P51970 172 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 RPS14P62263 151 aaKnown RBP11.54□□□□□ -0.56
DDX41-218ENST00000625286 ADAM9Q13443 819 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 EIF4HQ15056 248 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms