RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 VWCEQ96DN2 955 aa18.23■□□□□ 0.51
PCF11-207ENST00000624931 FAM167BQ9BTA0 163 aa18.23■□□□□ 0.51
PCF11-207ENST00000624931 FTHL17Q9BXU8 183 aa18.23■□□□□ 0.51
PCF11-207ENST00000624931 FRMD8Q9BZ67 464 aaPredicted RBP18.23■□□□□ 0.51
PCF11-207ENST00000624931 MCOLN1Q9GZU1 580 aa18.23■□□□□ 0.51
PCF11-207ENST00000624931 GDAP2Q9NXN4 497 aa18.23■□□□□ 0.51
PCF11-207ENST00000624931 ZNF212Q9UDV6 495 aa18.23■□□□□ 0.51
PCF11-207ENST00000624931 CLUHO75153 1309 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 CLTBP09497 229 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 CDH5P33151 784 aaPredicted RBP18.22■□□□□ 0.51
PCF11-207ENST00000624931 MXRA7P84157 204 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 SLC34A1Q06495 639 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 GLB1LQ6UWU2 654 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 ZNF280BQ86YH2 543 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 VPS52Q8N1B4 723 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 ZNF276Q8N554 614 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 C12orf29Q8N999 325 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 GLIS1Q8NBF1 620 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 MCUR1Q96AQ8 359 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 HEXIM2Q96MH2 286 aaKnown RBP18.22■□□□□ 0.51
PCF11-207ENST00000624931 CADM1Q9BY67 442 aaKnown RBP18.22■□□□□ 0.51
PCF11-207ENST00000624931 FAM49BQ9NUQ9 324 aa18.22■□□□□ 0.51
PCF11-207ENST00000624931 TSC2P49815 1807 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.21■□□□□ 0.51
PCF11-207ENST00000624931 F8W8V4 182 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 SKAP2O75563 359 aaPredicted RBP18.21■□□□□ 0.51
PCF11-207ENST00000624931 CXCL10P02778 98 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 PDGFRBP09619 1106 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 ADRA1DP25100 572 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 LMO2P25791 158 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 ITGB8P26012 769 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 ZBTB16Q05516 673 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 SLC18A2Q05940 514 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 UPP1Q16831 310 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 BBS12Q6ZW61 710 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 ADGRF2Q8IZF7 708 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 WDTC1Q8N5D0 677 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 FNIP1Q8TF40 1166 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 DCAKDQ8WVC6 231 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 RSAD2Q8WXG1 361 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 STMN2Q93045 179 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 SKA1Q96BD8 255 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 TMEM106CQ9BVX2 250 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 NT5C1AQ9BXI3 368 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 PRDM5Q9NQX1 630 aaPredicted RBP18.21■□□□□ 0.51
PCF11-207ENST00000624931 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.21■□□□□ 0.51
PCF11-207ENST00000624931 STX18Q9P2W9 335 aaKnown RBP18.21■□□□□ 0.51
PCF11-207ENST00000624931 HCSTQ9UBK5 93 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 HEY2Q9UBP5 337 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 CYTH4Q9UIA0 394 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 TIMM13Q9Y5L4 95 aaPredicted RBP18.21■□□□□ 0.51
PCF11-207ENST00000624931 IKBKGQ9Y6K9 419 aa18.21■□□□□ 0.51
PCF11-207ENST00000624931 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.2■□□□□ 0.5
PCF11-207ENST00000624931 DPPA5A6NC42 116 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 CYB561D2O14569 222 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 INPPL1O15357 1258 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 DDHD2O94830 711 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 MICAL2O94851 1124 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 EOMESO95936 686 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 ITGB1P05556 798 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 ETS1P14921 441 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 BRCC3P46736 316 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TUSC3Q13454 348 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TBCCQ15814 346 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TAZQ16635 292 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 GSTA3Q16772 222 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 ATP13A4Q4VNC1 1196 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 NOMO2Q5JPE7 1267 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 PPP1R15BQ5SWA1 713 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 DAB2IPQ5VWQ8 1189 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 WSCD1Q658N2 575 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 CD300LGQ6UXG3 332 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 LIMS2Q7Z4I7 341 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TTC8Q8TAM2 541 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 CPT1BQ92523 772 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 APOPT1Q96IL0 206 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 SENP8Q96LD8 212 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TSC22D3Q99576 134 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 CCDC28BQ9BUN5 200 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TMEM161AQ9NX61 479 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TJP2Q9UDY2 1190 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 SCOCQ9UIL1 159 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 ANGPTL2Q9UKU9 493 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 PCDHGC3Q9UN70 934 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 MICAL3Q7RTP6 2002 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 LPXNO60711 386 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 MAGEC1O60732 1142 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 HUS1O60921 280 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 ENTPD5O75356 428 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 IFNB1P01574 187 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 ESRRAP11474 423 aaPredicted RBP18.2■□□□□ 0.5
PCF11-207ENST00000624931 ACAT1P24752 427 aaKnown RBP18.2■□□□□ 0.5
PCF11-207ENST00000624931 NEK3P51956 506 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 RPL7AP62424 266 aaKnown RBP18.2■□□□□ 0.5
PCF11-207ENST00000624931 AP1B1Q10567 949 aa18.2■□□□□ 0.5
PCF11-207ENST00000624931 PRKD1Q15139 912 aaPredicted RBP18.2■□□□□ 0.5
PCF11-207ENST00000624931 MFN1Q8IWA4 741 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms