RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZXDBP98169 803 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 RAB6CQ53S08 254 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 BRMS1LQ5PSV4 323 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 CC2D1AQ6P1N0 951 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 DAAM2Q86T65 1068 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 DDX42Q86XP3 938 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 SYCE1Q8N0S2 351 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 EDAQ92838 391 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 ELSPBP1Q96BH3 223 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 RAB6CQ9H0N0 254 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 KIF9Q9HAQ2 790 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 ZFP14Q9HCL3 533 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 GKN1Q9NS71 199 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 COX16Q9P0S2 106 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 ALG6Q9Y672 507 aa20.61■□□□□ 0.89
PDLIM2-221ENST00000622702 NARSO43776 548 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 ECI2O75521 394 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 PALMO75781 387 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 STC2O76061 302 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 PRAMEF12O95522 483 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 MIPP30301 263 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 ZC3H12AQ5D1E8 599 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 NUGGCQ68CJ6 796 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 FAM131BQ86XD5 332 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 CPNE8Q86YQ8 564 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 UBALD2Q8IYN6 164 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 PLA2G2FQ9BZM2 168 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 SMG9Q9H0W8 520 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 GOLPH3Q9H4A6 298 aa20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 NUP210Q8TEM1 1887 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-221ENST00000622702 KCNU1A8MYU2 1149 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 COMTP21964 271 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 MTA1Q13330 715 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 DAB2IPQ5VWQ8 1189 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 UNC45BQ8IWX7 931 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 C17orf53Q8N3J3 647 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 CELF5Q8N6W0 485 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 TRIM58Q8NG06 486 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 UBE2Q2Q8WVN8 375 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 NTAN1Q96AB6 310 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 ALS2CR12Q96Q35 445 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 IRX2Q9BZI1 471 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 WDCPQ9H6R7 721 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 ARHGEF38Q9NXL2 777 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 DUSP12Q9UNI6 340 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 CCL26Q9Y258 94 aa20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 HELZP42694 1942 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-221ENST00000622702 LEFTY2O00292 366 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 PRPSAP2O60256 369 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 APOEP02649 317 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 HMBSP08397 361 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 AIF1P55008 147 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 SLC25A11Q02978 314 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 USP4Q13107 963 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 SCYL2Q6P3W7 929 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 KIAA1958Q8N8K9 716 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 SH3RF2Q8TEC5 729 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 RNF34Q969K3 372 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 AZIN2Q96A70 460 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 DCLK3Q9C098 648 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 OBP2AQ9NY56 170 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 USP18Q9UMW8 372 aa20.58■□□□□ 0.89
PDLIM2-221ENST00000622702 SPOPO43791 374 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 KIF5CO60282 957 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 GREM1O60565 184 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 TCF4P15884 667 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 HARS2P49590 506 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 SCAPQ12770 1279 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 ZNF77Q15935 545 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 HADHQ16836 314 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 LRRC38Q5VT99 294 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 CYP4V2Q6ZWL3 525 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 HTR3DQ70Z44 454 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 ZSCAN30Q86W11 494 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 CD101Q93033 1021 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 E2F7Q96AV8 911 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 RSPRY1Q96DX4 576 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 PEBP4Q96S96 227 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 TKTL2Q9H0I9 626 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 CFAP97Q9P2B7 532 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 HYOU1Q9Y4L1 999 aa20.57■□□□□ 0.88
PDLIM2-221ENST00000622702 E2F8A0AVK6 867 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 HEPACAM2A8MVW5 462 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 LATS1O95835 1130 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 KLKB1P03952 638 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 IRF1P10914 325 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 SRFP11831 508 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 IL1R2P27930 398 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 ADRA1BP35368 520 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 TAS2R40P59535 323 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 ARL13BQ3SXY8 428 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 BOLA3Q53S33 107 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 VITQ6UXI7 678 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 Q6ZNB5 142 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 POLNQ7Z5Q5 900 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 NT5DC3Q86UY8 548 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 PSTKQ8IV42 348 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 CCDC185Q8N715 623 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 ATP6V0D2Q8N8Y2 350 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 RIN3Q8TB24 985 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms