RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 HLA-EP13747 358 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 LCP1P13796 627 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 PRKCHP24723 683 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 OXTRP30559 389 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 COPAP53621 1224 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 MCCD1P59942 119 aaPredicted RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 ADIGQ0VDE8 80 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 BST2Q10589 180 aaKnown RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 GRIK2Q13002 908 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 SLC14A1Q13336 389 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 CUL2Q13617 745 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 ENPP2Q13822 863 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 HNRNPDQ14103 355 aaKnown RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 TRIP4Q15650 581 aaPredicted RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 BSPRYQ5W0U4 402 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 TMEM215Q68D42 235 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 ANKRD40Q6AI12 368 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 SERPINA13PQ6UXR4 307 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 FAM124AQ86V42 546 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 SIX6OS1Q8N1H7 587 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 ZCCHC9Q8N567 271 aaKnown RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 PNPLA1Q8N8W4 532 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 CYB5D2Q8WUJ1 264 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 DNASE2BQ8WZ79 361 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 NUP58Q9BVL2 599 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 SLC2A11Q9BYW1 496 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 OLA1Q9NTK5 396 aaKnown RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 RMND1Q9NWS8 449 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 USP36Q9P275 1121 aaKnown RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 PLA2G4CQ9UP65 541 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 MSRB2Q9Y3D2 182 aa9.74□□□□□ -0.85
TARDBP-227ENST00000622057 MAP1BP46821 2468 aaKnown RBP9.74□□□□□ -0.85
TARDBP-227ENST00000622057 TMEM8BA6NDV4 472 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 SRRM3A6NNA2 597 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 YJEFN3A6XGL0 299 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 E7ENQ6 273 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 RGS7P49802 495 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 PMS1P54277 932 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 BCAT1P54687 386 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 YWHAEP62258 255 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 FKBP3Q00688 224 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 EIF4HQ15056 248 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 FNDC3BQ53EP0 1204 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ZNF658Q5TYW1 1059 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ISM2Q6H9L7 571 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 CHST9Q7L1S5 443 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 BHLHA9Q7RTU4 235 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 NAXDQ8IW45 347 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ZNF366Q8N895 744 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 CADM4Q8NFZ8 388 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 OR2T3Q8NH03 318 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 SETD7Q8WTS6 366 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ZCCHC14Q8WYQ9 949 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 SNX19Q92543 992 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ERCC4Q92889 916 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ZDHHC5Q9C0B5 715 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 GAREM1Q9H706 876 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 IL21RQ9HBE5 538 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 ABCC13Q9NSE7 274 aa9.73□□□□□ -0.85
TARDBP-227ENST00000622057 EIF2B4Q9UI10 523 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 HBS1LQ9Y450 684 aaKnown RBP9.73□□□□□ -0.85
TARDBP-227ENST00000622057 CHD8Q9HCK8 2581 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 GOLGA6L7A0A1B0GV03 622 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 TRIM49BA6NDI0 452 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 GOLGA6L4A6NEF3 574 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 BCAT2O15382 392 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-227ENST00000622057 SLC16A3O15427 465 aaKnown RBP9.72□□□□□ -0.85
TARDBP-227ENST00000622057 MSI1O43347 362 aaKnown RBP9.72□□□□□ -0.85
TARDBP-227ENST00000622057 GJB3O75712 270 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 HOXD9P28356 352 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-227ENST00000622057 HLA-FP30511 346 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 TMEM270Q6UE05 265 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 FAM217AQ8IXS0 508 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 RBBP8NLQ8NC74 664 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-227ENST00000622057 KCTD13Q8WZ19 329 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 LHX5Q9H2C1 402 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 CNGB3Q9NQW8 809 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 ABCB8Q9NUT2 735 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 STIM2Q9P246 746 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 ARMCX3Q9UH62 379 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-227ENST00000622057 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 COQ4Q9Y3A0 265 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 PCDHB4Q9Y5E5 795 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 ASCC3Q8N3C0 2202 aaKnown RBP9.72□□□□□ -0.85
TARDBP-227ENST00000622057 ADAMTS9Q9P2N4 1935 aa9.72□□□□□ -0.85
TARDBP-227ENST00000622057 ASPMQ8IZT6 3477 aa9.71□□□□□ -0.85
TARDBP-227ENST00000622057 TNRC6BQ9UPQ9 1833 aaKnown RBP9.71□□□□□ -0.85
TARDBP-227ENST00000622057 A0A1B0GVT2 93 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 O00370 1275 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 TBL1XO60907 577 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 SMC2O95347 1197 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 DNTTP04053 509 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 FTH1P19P0C7X4 201 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 SETSIPP0DME0 302 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 PABPC1P11940 636 aaKnown RBP9.71□□□□□ -0.86
TARDBP-227ENST00000622057 POLR2EP19388 210 aaKnown RBP9.71□□□□□ -0.86
TARDBP-227ENST00000622057 TBXAS1P24557 533 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-227ENST00000622057 ACSL1P33121 698 aa9.71□□□□□ -0.86
TARDBP-227ENST00000622057 MATKP42679 507 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms