RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 UGT1A10Q9HAW8 530 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 UGT1A8Q9HAW9 530 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 ETNK1Q9HBU6 452 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 TLR9Q9NR96 1032 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 FAM114A2Q9NRY5 505 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 PRKAG2Q9UGJ0 569 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 STAP1Q9ULZ2 295 aa10.9□□□□□ -0.66
VPS11-208ENST00000621676 DNM1LO00429 736 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 LRPAP1P30533 357 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 EFHC1Q5JVL4 640 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 STXBP5Q5T5C0 1151 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 RASIP1Q5U651 963 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 ARHGEF18Q6ZSZ5 1173 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 CYP4V2Q6ZWL3 525 aaPredicted RBP10.89□□□□□ -0.67
VPS11-208ENST00000621676 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 NPWQ8N729 165 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 PPM1NQ8N819 430 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 SLC22A17Q8WUG5 538 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 HHIPL1Q96JK4 782 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 FCRL2Q96LA5 508 aaPredicted RBP10.89□□□□□ -0.67
VPS11-208ENST00000621676 RASGRF2O14827 1237 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 RFPL2O75678 378 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 PRKCGP05129 697 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 BMP1P13497 986 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 C1QTNF8P60827 252 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 TERF2Q15554 542 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 CCNG2Q16589 344 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 PLPP4Q5VZY2 271 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 FAM47EQ6ZV65 393 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 FBXO36Q8NEA4 188 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 LRRC45Q96CN5 670 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 CASD1Q96PB1 797 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 SLC13A1Q9BZW2 595 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 ZDHHC18Q9NUE0 388 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 WBP1LQ9NX94 342 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 DTLQ9NZJ0 730 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 EXOC1LA0A1B0GW35 172 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 C3orf70A6NLC5 250 aaPredicted RBP10.89□□□□□ -0.67
VPS11-208ENST00000621676 GABRDO14764 452 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 HOXC8P31273 242 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 MAGEA4P43358 317 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 TUBP50607 506 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 TMPRSS15P98073 1019 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 TXNDC8Q6A555 127 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 NT5DC4Q86YG4 428 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 FBXO22Q8NEZ5 403 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 MYEOVQ96EZ4 313 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 RPRD1AQ96P16 312 aaPredicted RBP10.89□□□□□ -0.67
VPS11-208ENST00000621676 VRTNQ9H8Y1 702 aa10.89□□□□□ -0.67
VPS11-208ENST00000621676 WDR27A2RRH5 827 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 RFXAPO00287 272 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 TRAPPC3O43617 180 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 ZNF623O75123 536 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 PAGE1O75459 146 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 MTA2O94776 668 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 WARSP23381 471 aaKnown RBP10.88□□□□□ -0.67
VPS11-208ENST00000621676 PSMB4P28070 264 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 ELF1P32519 619 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 ADRA1BP35368 520 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 ELK3P41970 407 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 GLE1Q53GS7 698 aaKnown RBP10.88□□□□□ -0.67
VPS11-208ENST00000621676 LINGO4Q6UY18 593 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 DENND1CQ8IV53 801 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 MOCOSQ96EN8 888 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 SLC22A12Q96S37 553 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 LRRC19Q9H756 370 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 ARHGEF4Q9NR80 690 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 TMEM161AQ9NX61 479 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 C2orf78A6NCI8 922 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 SETSIPP0DME0 302 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 HSPA6P17066 643 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 RPS24P62847 133 aaKnown RBP10.88□□□□□ -0.67
VPS11-208ENST00000621676 CUL1Q13616 776 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 DHX34Q14147 1143 aaKnown RBP10.88□□□□□ -0.67
VPS11-208ENST00000621676 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 POM121L1PQ3SYA9 428 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 BOLA3Q53S33 107 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 PLEKHG4Q58EX7 1191 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 SLC26A9Q7LBE3 791 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 HNRNPLLQ8WVV9 542 aaKnown RBP10.88□□□□□ -0.67
VPS11-208ENST00000621676 ING5Q8WYH8 240 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 AZIN2Q96A70 460 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 TTPALQ9BTX7 342 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 IGFLR1Q9H665 355 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 MTMR10Q9NXD2 777 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 KIAA1257Q9ULG3 409 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 TRPM7Q96QT4 1865 aa10.88□□□□□ -0.67
VPS11-208ENST00000621676 IGHA2P01877 340 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
VPS11-208ENST00000621676 NOS2P35228 1153 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 RAB27AP51159 221 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 CYP4F8P98187 520 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 HIF1AQ16665 826 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 POLNQ7Z5Q5 900 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 IQCKQ8N0W5 287 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 OTUD6BQ8N6M0 293 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 C12orf76Q8N812 135 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms