RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ZNF449Q6P9G9 518 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 TMCO3Q6UWJ1 677 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ATF7IPQ6VMQ6 1270 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MICALCLQ6ZW33 695 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 LRRC8DQ7L1W4 858 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 PLEKHH3Q7Z736 793 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 CPLX4Q7Z7G2 160 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 CAND1Q86VP6 1230 aaKnown RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 RAB11FIP4Q86YS3 637 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 NKAIN3Q8N8D7 197 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MAFAQ8NHW3 353 aaPredicted RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ARRDC3Q96B67 414 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 FAM136AQ96C01 138 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 RNFT2Q96EX2 444 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MNTQ99583 582 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MXD3Q9BW11 206 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 AMBRA1Q9C0C7 1298 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ZCCHC17Q9NP64 241 aaKnown RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ZFP64Q9NPA5 681 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 KCNK9Q9NPC2 374 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 NFKBIL1Q9UBC1 381 aaPredicted RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 SLC25A10Q9UBX3 287 aaPredicted RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 TMCC3Q9ULS5 477 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 SLC12A4Q9UP95 1085 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MARCH11A6NNE9 402 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 E7ENX8 843 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MUSKO15146 869 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 RPS6KA4O75676 772 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 KAT7O95251 611 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 SLC3A2P08195 630 aaKnown RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 TMEM225BP0DP42 221 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 CXCR5P32302 372 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 LIPAP38571 399 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 SCNN1GP51170 649 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 PSMC6P62333 389 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 TAP2Q03519 686 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 FPGSQ05932 587 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 PTP4A2Q12974 167 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 EIF4A2Q14240 407 aaKnown RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 KCNJ12Q14500 433 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 DCAF17Q5H9S7 520 aaPredicted RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 METTL24Q5JXM2 366 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ZNF569Q5MCW4 686 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 LIPMQ5VYY2 423 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MAMDC4Q6UXC1 1216 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ARHGEF18Q6ZSZ5 1173 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 RTL10Q7L3V2 364 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 SYNE4Q8N205 404 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ZNF808Q8N4W9 903 aaPredicted RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 PTGR2Q8N8N7 351 aaPredicted RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 FSIP1Q8NA03 581 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 LPIN2Q92539 896 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 CTHRC1Q96CG8 243 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 R3HDM4Q96D70 268 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 MASTLQ96GX5 879 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 ASB2Q96Q27 587 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 NR1H4Q96RI1 486 aaPredicted RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 TPSD1Q9BZJ3 242 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 XPO4Q9C0E2 1151 aaKnown RBP4.2□□□□□ -1.74
LRRC39-204ENST00000620882 NKIRAS2Q9NYR9 191 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 PPP4R1LQ9P1A2 415 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 BAG5Q9UL15 447 aa4.2□□□□□ -1.74
LRRC39-204ENST00000620882 KDM3AQ9Y4C1 1321 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 A1L4Q6 167 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 TSPY2A6NKD2 308 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 NCR1O76036 304 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 CFIP05156 583 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 WEE2P0C1S8 567 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 TSPY3P0CV98 308 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 TSPY8P0CW00 308 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 ACADMP11310 421 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 TM4SF1P30408 202 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 RPS19P39019 145 aaKnown RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 PNPLA4P41247 253 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 PAFAH1B1P43034 410 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 MMP14P50281 582 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 RCAN1P53805 252 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 EPHB4P54760 987 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 TAS2R50P59544 299 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 ARF3P61204 181 aaPredicted RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 RPS3AP61247 264 aaKnown RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 RPS7P62081 194 aaKnown RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 ARF1P84077 181 aaKnown RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 TSPY1Q01534 308 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 SEMA3BQ13214 749 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 HLXQ14774 488 aaPredicted RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 SEC23BQ15437 767 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 MED22Q15528 200 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 PKN2Q16513 984 aaKnown RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 NAPEPLDQ6IQ20 393 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 PLBD1Q6P4A8 553 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 MON1AQ86VX9 555 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 PLD5Q8N7P1 536 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 MIEF2Q96C03 454 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 ZMAT2Q96NC0 199 aaKnown RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 LENG8Q96PV6 779 aaPredicted RBP4.19□□□□□ -1.74
LRRC39-204ENST00000620882 EYA3Q99504 573 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 PIP5K1AQ99755 562 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 SLX1AQ9BQ83 275 aa4.19□□□□□ -1.74
LRRC39-204ENST00000620882 CCDC68Q9H2F9 335 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms