RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SNRNP25Q9BV90 132 aaKnown RBP20.18■□□□□ 0.82
PDLIM3-212ENST00000620787 NRDE2Q9H7Z3 1164 aa20.18■□□□□ 0.82
PDLIM3-212ENST00000620787 VDRP11473 427 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 STAT5BP51692 787 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 NIPAL4Q0D2K0 466 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 PEX6Q13608 980 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 PDK3Q15120 406 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 FBXL19Q6PCT2 694 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 UGT2A3Q6UWM9 527 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 DPH6Q7L8W6 267 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 HPS6Q86YV9 775 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 C10orf107Q8IVU9 208 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 OCEL1Q9H607 264 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 XPNPEP3Q9NQH7 507 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 ALDH1A2O94788 518 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 FARP2O94887 1054 aaPredicted RBP20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 SPATA31D3P0C874 917 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 MYL4P12829 197 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 MMEL1Q495T6 779 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 ANKRD20A4Q4UJ75 823 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 TCHHL1Q5QJ38 904 aaPredicted RBP20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 VWA5B1Q5TIE3 1220 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 SPATA31D4Q6ZUB0 917 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 FRMD7Q6ZUT3 714 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 SDCCAG8Q86SQ7 713 aaPredicted RBP20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 EFCAB3Q8N7B9 438 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 HIPK4Q8NE63 616 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 CMTM5Q96DZ9 223 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 HEXIM2Q96MH2 286 aaKnown RBP20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 NLRP4Q96MN2 994 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 TEX13BQ9BXU2 312 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 NGRNQ9NPE2 291 aaKnown RBP20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 BTBD7Q9P203 1132 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 AFG3L2Q9Y4W6 797 aa20.17■□□□□ 0.82
PDLIM3-212ENST00000620787 A6NJR5 290 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 DPYSL4O14531 572 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 B4GALT5O43286 388 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 LGR5O75473 907 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 HSPA1LP34931 641 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 SERPINB6P35237 376 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 SLC10A2Q12908 348 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 MAP3K21Q5TCX8 1036 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 ATF7IP2Q5U623 682 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 PACS1Q6VY07 963 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 SATL1Q86VE3 508 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 FBXW8Q8N3Y1 598 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 LRRC71Q8N4P6 559 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 CXorf38Q8TB03 319 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 ZNF670Q9BS34 389 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 GCOM2Q9BZD3 368 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 FAM96AQ9H5X1 160 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 PTPRFP10586 1907 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 WDR27A2RRH5 827 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 AP1G1O43747 822 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 PEX1O43933 1283 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 ITGB3P05106 788 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 CHN2P52757 468 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 GBE1Q04446 702 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 SEMA5AQ13591 1074 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 PRKG1Q13976 671 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 KBTBD6Q86V97 674 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 RTKN2Q8IZC4 609 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 PHTF2Q8N3S3 785 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 PPP4R1Q8TF05 950 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 OPTNQ96CV9 577 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 BTBD9Q96Q07 612 aa20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 GBA2Q9HCG7 927 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-212ENST00000620787 PDLIM1O00151 329 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 PFKMP08237 780 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 SMIM18P0DKX4 95 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 GRK2P25098 689 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 DEUP1Q05D60 604 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 TBL3Q12788 808 aaKnown RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 FAM160B1Q5W0V3 765 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 EPB41L1Q9H4G0 881 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 DCDC2Q9UHG0 476 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 MYO18AQ92614 2054 aaKnown RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 SMIM31A0A1B0GVY4 71 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 IL18RAPO95256 599 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 VAV1P15498 845 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 CYP2F1P24903 491 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 YY1P25490 414 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 HARS2P49590 506 aaKnown RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 HMGCS2P54868 508 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 MXD4Q14582 209 aaPredicted RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 PPP6R3Q5H9R7 873 aaPredicted RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 OGFRL1Q5TC84 451 aaPredicted RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 ZNF668Q96K58 619 aaPredicted RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 TBCBQ99426 244 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 CDT1Q9H211 546 aa20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 RPF1Q9H9Y2 349 aaKnown RBP20.15■□□□□ 0.82
PDLIM3-212ENST00000620787 LOC100653049A0A140TA62 436 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 ACKR2O00590 384 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 MDM4O15151 490 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 ADCY6O43306 1168 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 ZMPSTE24O75844 475 aa20.14■□□□□ 0.82
PDLIM3-212ENST00000620787 KRT34O76011 436 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms