RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ARHGEF19Q8IW93 802 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 MDGA1Q8NFP4 955 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 BHMTQ93088 406 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 TCEAL3Q969E4 200 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 ERLEC1Q96DZ1 483 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 DUSP16Q9BY84 665 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 POLMQ9NP87 494 aaPredicted RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 VPS45Q9NRW7 570 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 RXFP3Q9NSD7 469 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 CISHQ9NSE2 258 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 PCDHGA5Q9Y5G8 931 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 LAMA1P25391 3075 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 EIF3CLB5ME19 914 aaKnown RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 TRIM24O15164 1050 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 HOXC11O43248 304 aaPredicted RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 MAP3K13O43283 966 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 HMBSP08397 361 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■□□□ 12
CD40-207ENST00000620709 PRKCIP41743 596 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 WASP42768 502 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 KRT83P78385 493 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 ARID5AQ03989 594 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 PREPLQ4J6C6 727 aaPredicted RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 GRAMD4Q6IC98 578 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 NUDT18Q6ZVK8 323 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 ENOSF1Q7L5Y1 443 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 MIB1Q86YT6 1006 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 PPM1KQ8N3J5 372 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 ACRBPQ8NEB7 543 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 HMGB4Q8WW32 186 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 RLN3Q8WXF3 142 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 TATDN2Q93075 761 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 EIF3CQ99613 913 aaKnown RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 ARID3AQ99856 593 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 BBS2Q9BXC9 721 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 CYLDQ9NQC7 956 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 DNAJC17Q9NVM6 304 aaKnown RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 RASAL2Q9UJF2 1139 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 DNMT3LQ9UJW3 386 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 TCRBV21S2A2A0A5A6 115 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 AKR1B10O60218 316 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 RALAP11233 206 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 BCKDHBP21953 392 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 DHPSP49366 369 aaPredicted RBP16.85■□□□□ 0.29
CD40-207ENST00000620709 KIF11P52732 1056 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 GCNT1Q02742 428 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 ARHGAP44Q17R89 818 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 HTR3DQ70Z44 454 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 IRF2BP2Q7Z5L9 587 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
CD40-207ENST00000620709 TMEM176AQ96HP8 235 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 XPO6Q96QU8 1125 aaKnown RBP16.85■□□□□ 0.29
CD40-207ENST00000620709 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.85■□□□□ 0.29
CD40-207ENST00000620709 THADAQ6YHU6 1953 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 ABCA7Q8IZY2 2146 aa16.85■□□□□ 0.29
CD40-207ENST00000620709 GFPT2O94808 682 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 TYRP14679 529 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 KIR2DL1P43626 348 aaPredicted RBP16.84■□□□□ 0.29
CD40-207ENST00000620709 PLA2G4AP47712 749 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 SPA17Q15506 151 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 STPG1Q5TH74 334 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 SCD5Q86SK9 330 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 TADA2BQ86TJ2 420 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 C11orf74Q86VG3 221 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 RASSF3Q86WH2 238 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 REXO1L1PQ8IX06 675 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 ETFBKMTQ8IXQ9 262 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 PHTF2Q8N3S3 785 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 TTC39CQ8N584 583 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 SLC4A11Q8NBS3 891 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 SPACA7Q96KW9 195 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
CD40-207ENST00000620709 ADAM23O75077 832 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 RAD23BP54727 409 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 SLC8A3P57103 927 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 EFEMP1Q12805 493 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 ASTE1Q2TB18 679 aaPredicted RBP16.83■□□□□ 0.28
CD40-207ENST00000620709 HSF5Q4G112 596 aaPredicted RBP16.83■□□□□ 0.28
CD40-207ENST00000620709 PLA2G2CQ5R387 149 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 PMS2CLQ68D20 193 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 RNF43Q68DV7 783 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 ARMCX6Q7L4S7 300 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 CYP2U1Q7Z449 544 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 TERB1Q8NA31 727 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 C16orf45Q96MC5 204 aaPredicted RBP16.83■□□□□ 0.28
CD40-207ENST00000620709 KREMEN1Q96MU8 473 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 HAUS4Q9H6D7 363 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 PLK2Q9NYY3 685 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 WDR35Q9P2L0 1181 aa16.83■□□□□ 0.28
CD40-207ENST00000620709 MYO18AQ92614 2054 aaKnown RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 A0A0A0MRY4 1105 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 BCLAF3A2AJT9 711 aaKnown RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 KIF2AO00139 706 aaPredicted RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 LCA5LO95447 670 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 PNMA6AP0CW24 399 aaPredicted RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 CD19P15391 556 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 TBXAS1P24557 533 aaPredicted RBP16.82■□□□□ 0.28
CD40-207ENST00000620709 PSEN1P49768 467 aa16.82■□□□□ 0.28
CD40-207ENST00000620709 GOLGA7BQ2TAP0 167 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms