RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TBX4P57082 545 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 TPD52L1Q16890 204 aaPredicted RBP17.88■□□□□ 0.45
HMGN3-203ENST00000620514 EXOC3L4Q17RC7 722 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 HSP90AA4PQ58FG1 418 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 ADGRF1Q5T601 910 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 STPG1Q5TH74 334 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 RFWD3Q6PCD5 774 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 DEFB119Q8N690 84 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 DQX1Q8TE96 717 aaKnown RBP17.88■□□□□ 0.45
HMGN3-203ENST00000620514 GOLGA1Q92805 767 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 TMA16Q96EY4 203 aaKnown RBP17.88■□□□□ 0.45
HMGN3-203ENST00000620514 SLC4A5Q9BY07 1137 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 SLC2A11Q9BYW1 496 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 NUP62CLQ9H1M0 184 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 THAP9Q9H5L6 903 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 SIX2Q9NPC8 291 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 ELOVL2Q9NXB9 296 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 APEX2Q9UBZ4 518 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 PLXND1Q9Y4D7 1925 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 E5RJQ4 531 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 PAPSS1O43252 624 aaPredicted RBP17.87■□□□□ 0.45
HMGN3-203ENST00000620514 MED7O43513 233 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 LATS1O95835 1130 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 SLC6A4P31645 630 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
HMGN3-203ENST00000620514 ACADSBP45954 432 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 BYSLQ13895 437 aaKnown RBP17.87■□□□□ 0.45
HMGN3-203ENST00000620514 ZNF234Q14588 700 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 ADAM32Q8TC27 787 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 UCMAQ8WVF2 138 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 FAM149B1Q96BN6 582 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 MRGPRX1Q96LB2 322 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 EDEM2Q9BV94 578 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 CIPCQ9C0C6 399 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 TJP2Q9UDY2 1190 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 CYP8B1Q9UNU6 501 aa17.87■□□□□ 0.45
HMGN3-203ENST00000620514 IGHV1OR15-9A0A0B4J2B8 117 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 LNP1A1A4G5 178 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 GTPBP10A4D1E9 387 aaKnown RBP17.86■□□□□ 0.45
HMGN3-203ENST00000620514 TM4SF5O14894 197 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 ZBTB24O43167 697 aaPredicted RBP17.86■□□□□ 0.45
HMGN3-203ENST00000620514 ACSL4O60488 711 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 HLA-FP30511 346 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 RPL6Q02878 288 aaKnown RBP17.86■□□□□ 0.45
HMGN3-203ENST00000620514 ENPP2Q13822 863 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 MEA1Q16626 185 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 MAN2A1Q16706 1144 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 FUT11Q495W5 492 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 FAM133BQ5BKY9 247 aaKnown RBP17.86■□□□□ 0.45
HMGN3-203ENST00000620514 PPM1JQ5JR12 505 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 SYPL2Q5VXT5 272 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 NUGGCQ68CJ6 796 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 RNF43Q68DV7 783 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 IL31Q6EBC2 164 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 NADSYN1Q6IA69 706 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 KIAA1324Q6UXG2 1013 aaKnown RBP17.86■□□□□ 0.45
HMGN3-203ENST00000620514 TAC4Q86UU9 113 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 WFDC5Q8TCV5 224 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 STK32AQ8WU08 396 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 SHC3Q92529 594 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 MYEOVQ96EZ4 313 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 FCRL2Q96LA5 508 aaPredicted RBP17.86■□□□□ 0.45
HMGN3-203ENST00000620514 FAM81BQ96LP2 452 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 TMEM74BQ9NUR3 256 aa17.86■□□□□ 0.45
HMGN3-203ENST00000620514 ATXN2Q99700 1313 aaKnown RBP17.86■□□□□ 0.45
HMGN3-203ENST00000620514 KHNYNO15037 678 aaKnown RBP17.85■□□□□ 0.45
HMGN3-203ENST00000620514 PNMA6AP0CW24 399 aaPredicted RBP17.85■□□□□ 0.45
HMGN3-203ENST00000620514 ITPKAP23677 461 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 PRKCHP24723 683 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 ERCC5P28715 1186 aaPredicted RBP17.85■□□□□ 0.45
HMGN3-203ENST00000620514 SLC11A2P49281 568 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 ZNF445P59923 1031 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 IRX4P78413 519 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 RING1Q06587 406 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 EIF4HQ15056 248 aaKnown RBP17.85■□□□□ 0.45
HMGN3-203ENST00000620514 TAF5Q15542 800 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 MIIPQ5JXC2 388 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 PIK3R6Q5UE93 754 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 LYSMD4Q5XG99 296 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 DPY19L2P1Q6NXN4 242 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 CLEC17AQ6ZS10 378 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 TMEM110Q86TL2 294 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 PASD1Q8IV76 773 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 UNC45BQ8IWX7 931 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 WDTC1Q8N5D0 677 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 ABCB8Q9NUT2 735 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 DNAJC12Q9UKB3 198 aa17.85■□□□□ 0.45
HMGN3-203ENST00000620514 TNRC6BQ9UPQ9 1833 aaKnown RBP17.85■□□□□ 0.45
HMGN3-203ENST00000620514 C4orf47A7E2U8 309 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 NPC1O15118 1278 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 SART1O43290 800 aaKnown RBP17.84■□□□□ 0.45
HMGN3-203ENST00000620514 AP5Z1O43299 807 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 TBL1XO60907 577 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 ZNF217O75362 1048 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 PRKCSHP14314 528 aaPredicted RBP17.84■□□□□ 0.45
HMGN3-203ENST00000620514 PITX1P78337 314 aaPredicted RBP17.84■□□□□ 0.45
HMGN3-203ENST00000620514 PDCLQ13371 301 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 STARD3Q14849 445 aa17.84■□□□□ 0.45
HMGN3-203ENST00000620514 VWA3BQ502W6 1294 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms