RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 ICE2Q659A1 982 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 SHISA2Q6UWI4 295 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 SLCO4C1Q6ZQN7 724 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 DNAJB7Q7Z6W7 309 aaPredicted RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 ZSCAN18Q8TBC5 510 aaPredicted RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 ANKRD7Q92527 254 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 SMARCD1Q96GM5 515 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 MED15Q96RN5 788 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 PNKPQ96T60 521 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 REEP2Q9BRK0 252 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 LACRTQ9GZZ8 138 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 UCK1Q9HA47 277 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 MBD1Q9UIS9 605 aaPredicted RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 SLC6A14Q9UN76 642 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 BAZ2BQ9UIF8 2168 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 IGLV3-10A0A075B6K4 115 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 TEX51A0A1B0GUA7 166 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 FAM170BA6NMN3 283 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 TMX2-CTNND1H3BSU7 103 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CDX4O14627 284 aaPredicted RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 VILLO15195 856 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CLDN3O15551 220 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 TSPAN3O60637 253 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CER1O95813 267 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 ASS1P00966 412 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 P4HA1P13674 534 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 HOXD13P35453 343 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CCT6AP40227 531 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 LMAN1P49257 510 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 TBX2Q13207 712 aaPredicted RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 APTXQ7Z2E3 356 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 EFCAB13Q8IY85 973 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CARFQ8N187 725 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 KRT222Q8N1A0 295 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 NT5C3BQ969T7 300 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 BTBD6Q96KE9 485 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 PREBQ9HCU5 417 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CNGB3Q9NQW8 809 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 HECAQ9UBI9 543 aaPredicted RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 JRKLQ9Y4A0 524 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CEP83Q9Y592 693 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CDY1Q9Y6F8 540 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 LRRK1Q38SD2 2015 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 ADAM12O43184 909 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 SART1O43290 800 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 MAGEC1O60732 1142 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 ARAFP10398 606 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 GABRB2P47870 512 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 SATB1Q01826 763 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 GUCY1B3Q02153 619 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 MYO1EQ12965 1108 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 CTTNQ14247 550 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 ERCC6LQ2NKX8 1250 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 DAB2IPQ5VWQ8 1189 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 KANK3Q6NY19 840 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 GRASPQ7Z6J2 395 aaPredicted RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 TMEM139Q8IV31 216 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 GUF1Q8N442 669 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 STKLD1Q8NE28 680 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 LPPQ93052 612 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 TNIP3Q96KP6 325 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 NLRP4Q96MN2 994 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 POLD4Q9HCU8 107 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 PPARGC1AQ9UBK2 798 aaKnown RBP5.69□□□□□ -1.5
CBWD3-215ENST00000619322 NAALADL1Q9UQQ1 740 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 PCDHGA8Q9Y5G5 932 aa5.69□□□□□ -1.5
CBWD3-215ENST00000619322 BTBD18B2RXH4 712 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 CYP17A1P05093 508 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 WEE2P0C1S8 567 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 ME1P48163 572 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 GPC5P78333 572 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 MORC3Q14149 939 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 PAN2Q504Q3 1202 aaKnown RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 SFMBT2Q5VUG0 894 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 NAIF1Q69YI7 327 aaPredicted RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 RHBDF2Q6PJF5 856 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 C20orf204Q6ZNR8 217 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 TRIML1Q8N9V2 468 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 EPS8L3Q8TE67 593 aaKnown RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 SNX29Q8TEQ0 813 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 LRRC15Q8TF66 581 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 ATRIPQ8WXE1 791 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 SLC39A13Q96H72 371 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 HSFY1Q96LI6 401 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 DDX50Q9BQ39 737 aaKnown RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 RSPH9Q9H1X1 276 aaPredicted RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 ADNPQ9H2P0 1102 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 ABI2Q9NYB9 513 aaPredicted RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 RGL1Q9NZL6 768 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 AGO2Q9UKV8 859 aaKnown RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 GOLGA6L6A8MZA4 724 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 RPP40O75818 363 aaKnown RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 CCDC172P0C7W6 258 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 NCAM1P13591 858 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 TRIM21P19474 475 aaKnown RBP5.68□□□□□ -1.5
CBWD3-215ENST00000619322 OR1D2P34982 312 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 CD97P48960 835 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 ERVPABLB-1P60509 514 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 IGBP1P78318 339 aa5.68□□□□□ -1.5
CBWD3-215ENST00000619322 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms