RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 DEFB128Q7Z7B8 93 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 ZSWIM1Q9BR11 485 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CYP4F12Q9HCS2 524 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 ABCA9Q8IUA7 1624 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MEI4A8MW99 385 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 RBAK-RBAKDNI3L0D1 243 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 RAMP2O60895 175 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 HIST1H2ABP04908 130 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CNGA2Q16280 664 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 HIST3H2AQ7L7L0 130 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CLEC10AQ8IUN9 316 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 RTL3Q8N8U3 475 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 LINC00116Q8NCU8 138 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 HIST1H2ACQ93077 130 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MAGED4Q96JG8 741 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 ERGIC2Q96RQ1 377 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 GPRC5DQ9NZD1 345 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 SPG21Q9NZD8 308 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PDP2Q9P2J9 529 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 NDOR1Q9UHB4 597 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 ANKRD6Q9Y2G4 727 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 IGSF6O95976 241 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 ABCB1P08183 1280 aaPredicted RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CALB2P22676 271 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 GRIK3Q13003 919 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MPP3Q13368 585 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MARC1Q5VT66 337 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 SAMD7Q7Z3H4 446 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MCCC1Q96RQ3 725 aaPredicted RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 NDUFS2O75306 463 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MAPKAPK2P49137 400 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CRYMQ14894 314 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CCDC149Q6ZUS6 474 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 GLT6D1Q7Z4J2 308 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 HASPINQ8TF76 798 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CGRRF1Q99675 332 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PIK3C2BO00750 1634 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MSH4O15457 936 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CAP2P40123 477 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 GPR15P49685 360 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 KLK7P49862 253 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PRKAA2P54646 552 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 TBX4P57082 545 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 USP45Q70EL2 814 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 TPD52L3Q96J77 140 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PANX3Q96QZ0 392 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 FICDQ9BVA6 458 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 REXO4Q9GZR2 422 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 THAP2Q9H0W7 228 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PXMP2Q9NR77 195 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 TMEM39AQ9NV64 488 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 GPR75-ASB3A0A0A6YYF3 556 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 CCDC154A6NI56 674 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 GYS1P13807 737 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 GRK2P25098 689 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 CRABP2P29373 138 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 MOXD1Q6UVY6 613 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 PEG10Q86TG7 708 aaKnown RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ZKSCAN4Q969J2 545 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 KIFC1Q9BW19 673 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 SHCBP1LQ9BZQ2 653 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 GBA2Q9HCG7 927 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ZNF232Q9UNY5 417 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM25AB3EWG3 89 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM25CB3EWG5 89 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM25GB3EWG6 89 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ACSL4O60488 711 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 TPST1O60507 370 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 GYPCP04921 128 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ZNF7P17097 686 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 POLR2EP19388 210 aaKnown RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 OVOS1Q6IE37 1185 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM136AQ96C01 138 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ACSF2Q96CM8 615 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM120BQ96EK7 910 aaKnown RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 APOL4Q9BPW4 351 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 CTSEP14091 401 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 LAMTOR4Q0VGL1 99 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ZNF618Q5T7W0 954 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC25A24Q6NUK1 477 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 TMEM26Q6ZUK4 368 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 DAGLBQ8NCG7 672 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 FBXO36Q8NEA4 188 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 TRIM10Q9UDY6 481 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 PPIEQ9UNP9 301 aaKnown RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 PCDHB5Q9Y5E4 795 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 VAV1P15498 845 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ATN1P54259 1190 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 NME5P56597 212 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 PKN1Q16512 942 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 AGMOQ6ZNB7 445 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 TAAR1Q96RJ0 339 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 ACOX2Q99424 681 aa11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 KLF6Q99612 283 aaPredicted RBP11.43□□□□□ -0.58
CCDC144B-208ENST00000618081 SERPINH1P50454 418 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms