RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 HOXC13P31276 330 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 CNR2P34972 360 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 SLC11A2P49281 568 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 SLC6A3Q01959 620 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 MPPE1Q53F39 396 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 C10orf76Q5T2E6 689 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 OR6B2Q6IFH4 312 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 SLC26A9Q7LBE3 791 aa25.9■■□□□ 1.74
PMS1-220ENST00000618056 ZNF397Q8NF99 534 aaPredicted RBP25.9■■□□□ 1.74
PMS1-220ENST00000618056 IRAK2O43187 625 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 TRUB2O95900 331 aaKnown RBP25.89■■□□□ 1.73
PMS1-220ENST00000618056 MMEP08473 750 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 TIE1P35590 1138 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 EIF4EBP2Q13542 120 aaPredicted RBP25.89■■□□□ 1.73
PMS1-220ENST00000618056 DCAF6Q58WW2 860 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 EMC10Q5UCC4 262 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 HEATR6Q6AI08 1181 aaKnown RBP25.89■■□□□ 1.73
PMS1-220ENST00000618056 ALLCQ8N6M5 410 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 ADAM32Q8TC27 787 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 DDI1Q8WTU0 396 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 SLC2A11Q9BYW1 496 aa25.89■■□□□ 1.73
PMS1-220ENST00000618056 TEX33O43247 280 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 ACSL4O60488 711 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 SCNN1AP37088 669 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 NOMO3P69849 1222 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 CDR2Q01850 454 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 FILIP1LQ4L180 1135 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 TRMT11Q7Z4G4 463 aaKnown RBP25.88■■□□□ 1.73
PMS1-220ENST00000618056 DEFB106AQ8N104 65 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 CCDC33Q8N5R6 958 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 TXNDC5Q8NBS9 432 aaKnown RBP25.88■■□□□ 1.73
PMS1-220ENST00000618056 C18orf8Q96DM3 657 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 HHIPQ96QV1 700 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 CBX8Q9HC52 389 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 EBF1Q9UH73 591 aa25.88■■□□□ 1.73
PMS1-220ENST00000618056 A0A1B0GTH6 734 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 PRRT4C9JH25 899 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 KLF8O95600 359 aaPredicted RBP25.87■■□□□ 1.73
PMS1-220ENST00000618056 APBB3O95704 486 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 HOXD9P28356 352 aaPredicted RBP25.87■■□□□ 1.73
PMS1-220ENST00000618056 CDK17Q00537 523 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 CRY1Q16526 586 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 ZSCAN23Q3MJ62 389 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 FAM133BQ5BKY9 247 aaKnown RBP25.87■■□□□ 1.73
PMS1-220ENST00000618056 ERICH1Q86X53 443 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 ZNF513Q8N8E2 541 aaPredicted RBP25.87■■□□□ 1.73
PMS1-220ENST00000618056 MSANTD4Q8NCY6 345 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 SLC20A1Q8WUM9 679 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 HCN2Q9UL51 889 aa25.87■■□□□ 1.73
PMS1-220ENST00000618056 DAB1O75553 588 aa25.86■■□□□ 1.73
PMS1-220ENST00000618056 CHRNB2P17787 502 aa25.86■■□□□ 1.73
PMS1-220ENST00000618056 PITX1P78337 314 aaPredicted RBP25.86■■□□□ 1.73
PMS1-220ENST00000618056 FMO1Q01740 532 aa25.86■■□□□ 1.73
PMS1-220ENST00000618056 EOGTQ5NDL2 527 aa25.86■■□□□ 1.73
PMS1-220ENST00000618056 MPP7Q5T2T1 576 aa25.86■■□□□ 1.73
PMS1-220ENST00000618056 RNF43Q68DV7 783 aa25.86■■□□□ 1.73
PMS1-220ENST00000618056 TMA16Q96EY4 203 aaKnown RBP25.86■■□□□ 1.73
PMS1-220ENST00000618056 DDX50Q9BQ39 737 aaKnown RBP25.86■■□□□ 1.73
PMS1-220ENST00000618056 SGK1O00141 431 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 HRO43593 1189 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 ADAM23O75077 832 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 GRAP2O75791 330 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 CYP1A1P04798 512 aaPredicted RBP25.85■■□□□ 1.73
PMS1-220ENST00000618056 DGKEP52429 567 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 PIK3R6Q5UE93 754 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 NADSYN1Q6IA69 706 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 XYLT1Q86Y38 959 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 TSTD1Q8NFU3 115 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 CLEC4EQ9ULY5 219 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 SMG5Q9UPR3 1016 aaKnown RBP25.85■■□□□ 1.73
PMS1-220ENST00000618056 RALGAPA1Q6GYQ0 2036 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 A0A1W2PQC6 194 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 TSPAN3O60637 253 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 APOEP02649 317 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 SLC6A4P31645 630 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 NOS2P35228 1153 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 PXNP49023 591 aaPredicted RBP25.85■■□□□ 1.73
PMS1-220ENST00000618056 ZC3H12AQ5D1E8 599 aaKnown RBP25.85■■□□□ 1.73
PMS1-220ENST00000618056 NAA35Q5VZE5 725 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 TMEM92Q6UXU6 159 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 TRIM72Q6ZMU5 477 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 CACNA2D4Q7Z3S7 1137 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 LUZP1Q86V48 1076 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 RASSF3Q86WH2 238 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 CPA5Q8WXQ8 436 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 FAM204AQ9H8W3 233 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.85■■□□□ 1.73
PMS1-220ENST00000618056 RRN3Q9NYV6 651 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 MYO6Q9UM54 1294 aa25.85■■□□□ 1.73
PMS1-220ENST00000618056 PLXND1Q9Y4D7 1925 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 AXIN1O15169 862 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 SLC2A3P11169 496 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 HNRNPLP14866 589 aaKnown RBP eCLIP25.84■■□□□ 1.733e-6■■■□□ 15.5
PMS1-220ENST00000618056 GBP1P32455 592 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 MATKP42679 507 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 TPM4P67936 248 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 EGFLAMQ63HQ2 1017 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 RFWD3Q6PCD5 774 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 ANKS1BQ7Z6G8 1248 aa25.84■■□□□ 1.73
PMS1-220ENST00000618056 BTN2A3PQ96KV6 586 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms