RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SUPT3HO75486 399 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 KRT38O76015 456 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 SLC35G4P0C7Q5 338 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CORO1AP31146 461 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 GPC1P35052 558 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 DHX9Q08211 1270 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 LRGUKQ96M69 825 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CYP8B1Q9UNU6 501 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 SIT1Q9Y3P8 196 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MRC1P22897 1456 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CCDC189A1A4V9 331 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 KRT33AO76009 404 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 PCCBP05166 539 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 ZSCAN30Q86W11 494 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MCEMP1Q8IX19 187 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 BEND7Q8N7W2 519 aaPredicted RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 FOXJ1Q92949 421 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 FERD3LQ96RJ6 166 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 RUBCNLQ9H714 662 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 RBM22Q9NW64 420 aaKnown RBP eCLIP11.24□□□□□ -0.614e-7■■■■■ 29.9
POLR2A-209ENST00000617998 PHF24Q9UPV7 400 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MYO9BQ13459 2157 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 KIF20BQ96Q89 1820 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 TCRBV21S2A2A0A5A6 115 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 KLRG2A4D1S0 409 aaPredicted RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 HNRNPA1P09651 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 ALDH4A1P30038 563 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CLCNKBP51801 687 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 RBL2Q08999 1139 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 SETD3Q86TU7 594 aaPredicted RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 DESI2Q9BSY9 194 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 ADAM7Q9H2U9 754 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 STOML1Q9UBI4 398 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 PCDHA13Q9Y5I0 950 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 ENPP3O14638 875 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 SHHQ15465 462 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 TEAD2Q15562 447 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 SMTNL2Q2TAL5 461 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 DNAJB7Q7Z6W7 309 aaPredicted RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 B4GALT5O43286 388 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 GAS2L3Q86XJ1 694 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 TKTL2Q9H0I9 626 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 NEUROD4Q9HD90 331 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ZFATQ9P243 1243 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 TRAF3IP3Q9Y228 551 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 PIAS3Q9Y6X2 628 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 KCNA3P22001 575 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 SOAT1P35610 550 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ATP1A2P50993 1020 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 COPS2P61201 443 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ZNF720Q7Z2F6 126 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 GALNT13Q8IUC8 556 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ZDHHC17Q8IUH5 632 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
POLR2A-209ENST00000617998 CELF6Q96J87 481 aaKnown RBP11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ADAMTS10Q9H324 1103 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 OPHN1O60890 802 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 CCNYL3P0C7X3 344 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 DDIASQ8IXT1 998 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 MED8Q96G25 268 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 SPTLC3Q9NUV7 552 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 GJB5O95377 273 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 KLF8O95600 359 aaPredicted RBP11.23□□□□□ -0.61
POLR2A-209ENST00000617998 HSPA4LO95757 839 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 SOD2P04179 222 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ICAM3P32942 547 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ZC3H12AQ5D1E8 599 aaKnown RBP11.23□□□□□ -0.61
POLR2A-209ENST00000617998 ZNF112Q9UJU3 913 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 AP4E1Q9UPM8 1137 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 SMIM28A0A1B0GU29 152 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 HGSO14964 777 aaPredicted RBP11.23□□□□□ -0.61
POLR2A-209ENST00000617998 APRTP07741 180 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 CASP4P49662 377 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
POLR2A-209ENST00000617998 GOLGA2P5Q9HBQ8 144 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 FBXL5Q9UKA1 691 aa11.23□□□□□ -0.61
POLR2A-209ENST00000617998 LSP1P33241 339 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 GPS1Q13098 491 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 CBWD3Q5JTY5 395 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 CBWD5Q5RIA9 395 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 IRGCQ6NXR0 463 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 PPIEQ9UNP9 301 aaKnown RBP11.22□□□□□ -0.61
POLR2A-209ENST00000617998 TTC36A6NLP5 189 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 MEIS2O14770 477 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 TIMM44O43615 452 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
POLR2A-209ENST00000617998 ENO2P09104 434 aaPredicted RBP11.22□□□□□ -0.61
POLR2A-209ENST00000617998 CYP2A7P20853 494 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 CDH3P22223 829 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 RPL21P46778 160 aaKnown RBP11.22□□□□□ -0.61
POLR2A-209ENST00000617998 PLTPP55058 493 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 SGO1Q5FBB7 561 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 GDF3Q9NR23 364 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 PRR5-ARHGAP8B1AHC4 643 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 ASLP04424 464 aa11.22□□□□□ -0.61
POLR2A-209ENST00000617998 KLK3P07288 261 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms