RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 CHMP5Q9NZZ3 219 aa10.09□□□□□ -0.79
TARDBP-218ENST00000617172 SFMBT1Q9UHJ3 866 aa10.09□□□□□ -0.79
TARDBP-218ENST00000617172 PILRBQ9UKJ0 227 aa10.09□□□□□ -0.79
TARDBP-218ENST00000617172 PLA2G4CQ9UP65 541 aa10.09□□□□□ -0.79
TARDBP-218ENST00000617172 IGHV1OR15-9A0A0B4J2B8 117 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 GTPBP10A4D1E9 387 aaKnown RBP10.08□□□□□ -0.8
TARDBP-218ENST00000617172 WASH3PC4AMC7 463 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 IGLV3-27P01718 113 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
TARDBP-218ENST00000617172 OXTRP30559 389 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 PTGER3P43115 390 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 GPD2P43304 727 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ZNF33AQ06730 810 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 NNTQ13423 1086 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ZNF234Q14588 700 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 CAMK4Q16566 473 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 GEN1Q17RS7 908 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 TRIM61Q5EBN2 209 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 PEAR1Q5VY43 1037 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-218ENST00000617172 SLC23A3Q6PIS1 610 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 CREBRFQ8IUR6 639 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ARHGEF19Q8IW93 802 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 SCUBE3Q8IX30 993 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 FRMD1Q8N878 549 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 WFIKKN2Q8TEU8 576 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ZNF606Q8WXB4 792 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ZNF419Q96HQ0 510 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-218ENST00000617172 KREMEN1Q96MU8 473 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 SERPINB11Q96P15 392 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 MED15Q96RN5 788 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ZSWIM1Q9BR11 485 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 CIPCQ9C0C6 399 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 PRDM16Q9HAZ2 1276 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ITM2CQ9NQX7 267 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 ST7Q9NRC1 585 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 SLC6A14Q9UN76 642 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 NFE2L3Q9Y4A8 694 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 MYH10P35580 1976 aa10.08□□□□□ -0.8
TARDBP-218ENST00000617172 TYW5A2RUC4 315 aaKnown RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 PATE3B3GLJ2 98 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 CDX4O14627 284 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TSPAN3O60637 253 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 GABBR2O75899 941 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 KCNK5O95279 499 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 SERPINF2P08697 491 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 ACADMP11310 421 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 NCAM1P13591 858 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 CEACAM1P13688 526 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 GNSP15586 552 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 CSRP1P21291 193 aaKnown RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 ITPKAP23677 461 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 HOXD9P28356 352 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 CD6P30203 668 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 IL12RB1P42701 662 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 ATXN3P54252 364 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TBX4P57082 545 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 SNX16P57768 344 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 GFPT1Q06210 699 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TPD52L1Q16890 204 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 EXOC3L4Q17RC7 722 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 FUT11Q495W5 492 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 WDR45BQ5MNZ6 344 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TRIM65Q6PJ69 517 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 KIAA1324Q6UXG2 1013 aaKnown RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 SERPINA13PQ6UXR4 307 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 GBP6Q6ZN66 633 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 ARMCX6Q7L4S7 300 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TMEM110Q86TL2 294 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TMPRSS6Q8IU80 811 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 CCDC117Q8IWD4 279 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 FAM114A1Q8IWE2 563 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 AHI1Q8N157 1196 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 CADM4Q8NFZ8 388 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 PRCCQ92733 491 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-218ENST00000617172 SIPA1Q96FS4 1042 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 P2RY11Q96G91 374 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 MIS12Q9H081 205 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 THAP9Q9H5L6 903 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 FBRSQ9HAH7 460 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TMEM74BQ9NUR3 256 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 APEX2Q9UBZ4 518 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 SUSD2Q9UGT4 822 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 CYP8B1Q9UNU6 501 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 TLR6Q9Y2C9 796 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 RAD54BQ9Y620 910 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 NCOR2Q9Y618 2525 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 SPAG17Q6Q759 2223 aa10.07□□□□□ -0.8
TARDBP-218ENST00000617172 MYOFQ9NZM1 2061 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 LAMA1P25391 3075 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 RALGAPA1Q6GYQ0 2036 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 PIK3R2O00459 728 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 CAPN9O14815 690 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 MSI1O43347 362 aaKnown RBP10.06□□□□□ -0.8
TARDBP-218ENST00000617172 THAP12O43422 761 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 ACSL4O60488 711 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 LETM1O95202 739 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-218ENST00000617172 CFIP05156 583 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 EPHX1P07099 455 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 SYPP08247 313 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms