RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ARHGEF4Q9NR80 690 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 NINJ2Q9NZG7 142 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 DSEQ9UL01 958 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 STAP1Q9ULZ2 295 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 MAGED2Q9UNF1 606 aaPredicted RBP8.07□□□□□ -1.12
NEK3-207ENST00000617054 A0A1W2PQH9 124 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 GOLGA8KD6RF30 607 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 MFSD11O43934 449 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 CSF2RAP15509 400 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 CAPN2P17655 700 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 ADRA1BP35368 520 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 AP1B1Q10567 949 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 SF3A3Q12874 501 aaKnown RBP eCLIP8.07□□□□□ -1.122e-6■■□□□ 13.9
NEK3-207ENST00000617054 PDIA2Q13087 525 aaKnown RBP8.07□□□□□ -1.12
NEK3-207ENST00000617054 DUSP4Q13115 394 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 OLIG2Q13516 323 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 TFDP2Q14188 446 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 LRRC26Q2I0M4 334 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 MGAT5BQ3V5L5 792 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 SPOUT1Q5T280 376 aaKnown RBP8.07□□□□□ -1.12
NEK3-207ENST00000617054 SLC9A4Q6AI14 798 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 SYDE1Q6ZW31 735 aaPredicted RBP8.07□□□□□ -1.12
NEK3-207ENST00000617054 SCD5Q86SK9 330 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 CRIPAKQ8N1N5 446 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 RNF139Q8WU17 664 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 TEKT4Q8WW24 435 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 CASP10Q92851 521 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 KANSL3Q9P2N6 904 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 EFR3BQ9Y2G0 817 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 KCNK1O00180 336 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 TNFRSF10BO14763 440 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 OAZ2O95190 189 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 ARL4AP40617 200 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 GRIA1P42261 906 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 MAGEA4P43358 317 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 DEFB103AP81534 67 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 SLMAPQ14BN4 828 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 FUT10Q6P4F1 479 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 AUTS2Q8WXX7 1259 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 PRCCQ92733 491 aaPredicted RBP8.07□□□□□ -1.12
NEK3-207ENST00000617054 CELF6Q96J87 481 aaKnown RBP8.07□□□□□ -1.12
NEK3-207ENST00000617054 ZNF670Q9BS34 389 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 PCDH9Q9HC56 1237 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 CDY1Q9Y6F8 540 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
NEK3-207ENST00000617054 TSC2P49815 1807 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 EEF2KO00418 725 aaKnown RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 METTL18O95568 372 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 TTC4O95801 387 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 APRTP07741 180 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 HMBSP08397 361 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 SSTR1P30872 391 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 YWHAGP61981 247 aaKnown RBP eCLIP8.06□□□□□ -1.12
NEK3-207ENST00000617054 BBS9Q3SYG4 887 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 RWDD4Q6NW29 188 aaKnown RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 OTOP2Q7RTS6 562 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 NPAS4Q8IUM7 802 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 IGDCC3Q8IVU1 814 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 CYP4X1Q8N118 509 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 PRR7Q8TB68 274 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 DQX1Q8TE96 717 aaKnown RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 FAF2Q96CS3 445 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 ZCWPW1Q9H0M4 648 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 OR12D3Q9UGF7 316 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 CEP290O15078 2479 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 C3orf80F5H4A9 247 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 INPPL1O15357 1258 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 TRAPPC3O43617 180 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 FBXO21O94952 628 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 VNN2O95498 520 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 FAM163BP0C2L3 166 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 VAV1P15498 845 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 ERCC2P18074 760 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 TYMPP19971 482 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 NR1D1P20393 614 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 DNAJB2P25686 324 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 ALDH7A1P49419 539 aaKnown RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 GABPB1Q06547 395 aaPredicted RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 BTBD8Q5XKL5 378 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 PM20D1Q6GTS8 502 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 C4orf50Q6ZRC1 276 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 ANKRD33Q7Z3H0 272 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 MIB1Q86YT6 1006 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 ZCCHC9Q8N567 271 aaKnown RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 NPWQ8N729 165 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 TTC16Q8NEE8 873 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 WDR83Q9BRX9 315 aaKnown RBP8.06□□□□□ -1.12
NEK3-207ENST00000617054 VPS37BQ9H9H4 285 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 FBXW11Q9UKB1 542 aa8.06□□□□□ -1.12
NEK3-207ENST00000617054 POC1B-GALNT4F8VUJ3 575 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 EPHB2P29323 1055 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 EFTUD2Q15029 972 aaKnown RBP eCLIP8.05□□□□□ -1.12
NEK3-207ENST00000617054 LRIG3Q6UXM1 1119 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 RFX8Q6ZV50 586 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 ARCQ7LC44 396 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms