RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 VAV1P15498 845 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 LIG3P49916 1009 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 ZNF135P52742 658 aaPredicted RBP16.25■□□□□ 0.19
NR1H3-235ENST00000616973 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 CDK16Q00536 496 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 ACTN3Q08043 901 aaPredicted RBP16.25■□□□□ 0.19
NR1H3-235ENST00000616973 NME3Q13232 169 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 ITGA7Q13683 1181 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 PDK1Q15118 436 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 INTS6LQ5JSJ4 861 aaKnown RBP16.25■□□□□ 0.19
NR1H3-235ENST00000616973 PM20D1Q6GTS8 502 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 ZNF534Q76KX8 674 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 BHLHA9Q7RTU4 235 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 ZNF598Q86UK7 904 aaKnown RBP16.25■□□□□ 0.19
NR1H3-235ENST00000616973 C4orf33Q8N1A6 199 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 SLC7A14Q8TBB6 771 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 MYLPFQ96A32 169 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 MRRFQ96E11 262 aaKnown RBP16.25■□□□□ 0.19
NR1H3-235ENST00000616973 FERMT1Q9BQL6 677 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 FBXW11Q9UKB1 542 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 MFHAS1Q9Y4C4 1052 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 TTLL3Q9Y4R7 772 aa16.25■□□□□ 0.19
NR1H3-235ENST00000616973 EEF2KO00418 725 aaKnown RBP16.24■□□□□ 0.19
NR1H3-235ENST00000616973 DCLK1O15075 740 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 FAM155BO75949 473 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 POMCP01189 267 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 CA4P22748 312 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 PRKCHP24723 683 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 FOXN2P32314 431 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 GBP2P32456 591 aaPredicted RBP16.24■□□□□ 0.19
NR1H3-235ENST00000616973 RPA3P35244 121 aaPredicted RBP16.24■□□□□ 0.19
NR1H3-235ENST00000616973 MTM1Q13496 603 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 KBTBD12Q3ZCT8 623 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 ANKRD20A2Q5SQ80 823 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 SYCP2LQ5T4T6 812 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 ANKRD20A1Q5TYW2 823 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 ANKRD20A3Q5VUR7 823 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 RFX8Q6ZV50 586 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 RNF169Q8NCN4 708 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 LRRN4Q8WUT4 740 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 SIGLEC10Q96LC7 697 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 PLCD4Q9BRC7 762 aa16.24■□□□□ 0.19
NR1H3-235ENST00000616973 EIF2B3Q9NR50 452 aaKnown RBP16.24■□□□□ 0.19
NR1H3-235ENST00000616973 ZC3H7BQ9UGR2 993 aaKnown RBP16.24■□□□□ 0.19
NR1H3-235ENST00000616973 MYO18AQ92614 2054 aaKnown RBP16.24■□□□□ 0.19
NR1H3-235ENST00000616973 SYNJ2BP-COX16A0A087WUM0 186 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 PPP1R12AO14974 1030 aaPredicted RBP16.23■□□□□ 0.19
NR1H3-235ENST00000616973 OPHN1O60890 802 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 B3GAT3O94766 335 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 STK10O94804 968 aaKnown RBP16.23■□□□□ 0.19
NR1H3-235ENST00000616973 SUN1O94901 812 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 USP17L7P0C7H9 530 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 MLNP12872 115 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 KRT4P19013 534 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 SARNPP82979 210 aaKnown RBP16.23■□□□□ 0.19
NR1H3-235ENST00000616973 CAP1Q01518 475 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 MTFR1Q15390 333 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 MAPRE1Q15691 268 aaKnown RBP16.23■□□□□ 0.19
NR1H3-235ENST00000616973 PDK4Q16654 411 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 MAP3K21Q5TCX8 1036 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 DCLRE1AQ6PJP8 1040 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 PDZD4Q76G19 769 aaPredicted RBP16.23■□□□□ 0.19
NR1H3-235ENST00000616973 ECHDC2Q86YB7 292 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 TMPRSS4Q9NRS4 437 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 RNF186Q9NXI6 227 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 COX16Q9P0S2 106 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 ZNF180Q9UJW8 692 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 IKBKGQ9Y6K9 419 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 TM9SF1O15321 606 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 CREB3O43889 395 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 INHBAP08476 426 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 NCAM1P13591 858 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 ELNP15502 786 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 TYMPP19971 482 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 BRCC3P46736 316 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 SP3Q02447 781 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 CYS1Q717R9 158 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 BEND5Q7L4P6 421 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 RNF180Q86T96 592 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 BANPQ8N9N5 519 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 RSPH1Q8WYR4 309 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 CFAP36Q96G28 342 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 SUSD3Q96L08 255 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 LGMNQ99538 433 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 EBNA1BP2Q99848 306 aaKnown RBP16.23■□□□□ 0.19
NR1H3-235ENST00000616973 TRIM62Q9BVG3 475 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 DMAP1Q9NPF5 467 aaPredicted RBP16.23■□□□□ 0.19
NR1H3-235ENST00000616973 NOD1Q9Y239 953 aa16.23■□□□□ 0.19
NR1H3-235ENST00000616973 I3L4J1 428 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 APOEP02649 317 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 CXCR3P49682 368 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 RABGGTBP53611 331 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 SLC1A5Q15758 541 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 ARL13BQ3SXY8 428 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 SPATA21Q7Z572 469 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 SLC26A11Q86WA9 606 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 THEM5Q8N1Q8 247 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 APBB2Q92870 758 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 P2RY11Q96G91 374 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms