RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 PRDM12Q9H4Q4 367 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 MANSC1Q9H8J5 431 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 CD248Q9HCU0 757 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 FAM105AQ9NUU6 356 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 MARCH2Q9P0N8 246 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 ZMYND8Q9ULU4 1186 aaPredicted RBP3.91□□□□□ -1.78
LTN1-207ENST00000614971 ARHGAP26Q9UNA1 814 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 NFASCO94856 1347 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 SPTAN1Q13813 2472 aaKnown RBP3.91□□□□□ -1.78
LTN1-207ENST00000614971 SRP72O76094 671 aaKnown RBP3.91□□□□□ -1.78
LTN1-207ENST00000614971 PCDH8O95206 1070 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 MYL2P10916 166 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 CTPS1P17812 591 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 CYP3A7P24462 503 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 ADRA1DP25100 572 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 SLC11A2P49281 568 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 SLC26A2P50443 739 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 GBE1Q04446 702 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 MEA1Q16626 185 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 ZNF618Q5T7W0 954 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 CHADLQ6NUI6 762 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 ZPBP2Q6X784 338 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 UNC45BQ8IWX7 931 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 TCP10LQ8TDR4 215 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 MYLPFQ96A32 169 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 LENG9Q96B70 501 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 MAGED4Q96JG8 741 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 HBEGFQ99075 208 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 R3HDMLQ9H3Y0 253 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 SLC25A13Q9UJS0 675 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 PHTF1Q9UMS5 762 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 CLCA2Q9UQC9 943 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 USP15Q9Y4E8 981 aaPredicted RBP3.91□□□□□ -1.78
LTN1-207ENST00000614971 NRCAMQ92823 1304 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 NRXN3Q9Y4C0 1643 aa3.91□□□□□ -1.78
LTN1-207ENST00000614971 MYBPHLA2RUH7 354 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 CCDC85CA6NKD9 419 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 CBX6O95503 412 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 AGTP01019 485 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 ERBB2P04626 1255 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MCF2P10911 925 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 HNF4AP41235 474 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 AQP5P55064 265 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 GCNT1Q02742 428 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 CTBP1Q13363 440 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 SNX17Q15036 470 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 PMF1Q6P1K2 205 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 BTNL9Q6UXG8 535 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TRPM8Q7Z2W7 1104 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 ZNF677Q86XU0 584 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 FAM71AQ8IYT1 594 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 SNX31Q8N9S9 440 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 SCAMP5Q8TAC9 235 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MYCBPAPQ8TBZ2 947 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 ING5Q8WYH8 240 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 INPP5DQ92835 1189 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 ARHGAP39Q9C0H5 1083 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 YIPF3Q9GZM5 350 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 CACYBPQ9HB71 228 aaKnown RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 CDHR5Q9HBB8 845 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 PHLPP1O60346 1717 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MYH15Q9Y2K3 1946 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 SMIM28A0A1B0GU29 152 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 LZTS3O60299 673 aaPredicted RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 RAMP2O60895 175 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MMP3P08254 477 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MZF1P28698 734 aaPredicted RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 ZNF844Q08AG5 666 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 STILQ15468 1287 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MARC1Q5VT66 337 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TMC3Q7Z5M5 1100 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TMEM139Q8IV31 216 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 C2orf73Q8N5S3 287 aaPredicted RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 MAB21L3Q8N8X9 362 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 EXD1Q8NHP7 514 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MORC4Q8TE76 937 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 SHC3Q92529 594 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 JADE3Q92613 823 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TUBGCP3Q96CW5 907 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MAML3Q96JK9 1138 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 FAM96AQ9H5X1 160 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 RUBCNLQ9H714 662 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 APOBEC3GQ9HC16 384 aaKnown RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 WARS2Q9UGM6 360 aaKnown RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 ITGA11Q9UKX5 1188 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 CDY1Q9Y6F8 540 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 IQCF5A8MTL0 148 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 YWHAQP27348 245 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 SPRP35270 261 aaPredicted RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 KPNA2P52292 529 aaKnown RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 BFSP2Q13515 415 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 STARD3Q14849 445 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TXNRD3NBQ6F5E7 133 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TAF2Q6P1X5 1199 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TTC39CQ8N584 583 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 HTR3CQ8WXA8 447 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 RNF31Q96EP0 1072 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 CAB39LQ9H9S4 337 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 GPAMQ9HCL2 828 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 DMAP1Q9NPF5 467 aaPredicted RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms