RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZNF560Q96MR9 790 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 MRPL45Q9BRJ2 306 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 USP3Q9Y6I4 520 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CCL15-CCL14A0A0B4J2E2 113 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SPATA31D3P0C874 917 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 RBP3P10745 1247 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 FGFR1P11362 822 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ALADP13716 330 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PRKCHP24723 683 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 BCAT1P54687 386 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ZRSR2Q15696 482 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CCL15Q16663 113 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SOWAHAQ2M3V2 549 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 C1orf146Q5VVC0 180 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ANKRD22Q5VYY1 191 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SPATA31D4Q6ZUB0 917 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 AGR3Q8TD06 166 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PYROXD1Q8WU10 500 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 MAK16Q9BXY0 300 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 VPS11Q9H270 941 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ETNK2Q9NVF9 386 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 RAD54BQ9Y620 910 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TRIP11Q15643 1979 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 MYOCOSA0A1B0GUC4 107 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PAPSS1O43252 624 aaPredicted RBP11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SMIM10L2AP0DMW4 78 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SMIM10L2BP0DMW5 78 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SERPINB6P35237 376 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ARFIP2P53365 341 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 IGBP1P78318 339 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CDK18Q07002 472 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PEX6Q13608 980 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PLEKHG4Q58EX7 1191 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CHSY1Q86X52 802 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 BANPQ8N9N5 519 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PPP1R36Q96LQ0 422 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TUBGCP5Q96RT8 1024 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 NDNQ99608 321 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SCN1AP35498 2009 aa11.21□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 LOC100653049A0A140TA62 436 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FAM237BA0A1B0GVD1 139 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 APOL1O14791 398 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KLF11O14901 512 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DCTN3O75935 186 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ATP5HO75947 161 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KRT34O76011 436 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TMEM63AO94886 807 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NPTXRO95502 500 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 ZNF865P0CJ78 1059 aaPredicted RBP11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GRAMD1BQ3KR37 738 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KCNT1Q5JUK3 1230 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 UBXN11Q5T124 520 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RINLQ6ZS11 566 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 KBTBD2Q8IY47 623 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HACE1Q8IYU2 909 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CCDC33Q8N5R6 958 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC44A1Q8WWI5 657 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FAM111AQ96PZ2 611 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MECRQ9BV79 373 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DCLRE1BQ9H816 532 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PREBQ9HCU5 417 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 XPO7Q9UIA9 1087 aaKnown RBP11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PDE5AO76074 875 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 RPLP2P05387 115 aaKnown RBP11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MLNP12872 115 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GNAZP19086 355 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 BGNP21810 368 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PAX3P23760 479 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SDC4P31431 198 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 L1CAMP32004 1257 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CDH6P55285 790 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 HDAC4P56524 1084 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 CDK16Q00536 496 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DBN1Q16643 649 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SMTNL2Q2TAL5 461 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 NPLOC4Q8TAT6 608 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 UBA3Q8TBC4 463 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 SLC26A7Q8TE54 656 aa11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 EIF2B3Q9NR50 452 aaKnown RBP11.21□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 XPO1O14980 1071 aaKnown RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DNAJC6O75061 913 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 DGKIO75912 1065 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 MSX2P35548 267 aaPredicted RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 COG7P83436 770 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 FRG1Q14331 258 aaKnown RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TAF5Q15542 800 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 PPP6R3Q5H9R7 873 aaPredicted RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 LPCAT4Q643R3 524 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 OR6B2Q6IFH4 312 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRIM74Q86UV6 250 aa11.2□□□□□ -0.62
SENP3-EIF4A1-201ENST00000614237 TRIM73Q86UV7 250 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms