RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 TBCBQ99426 244 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 NMUR1Q9HB89 426 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 TLR8Q9NR97 1041 aaKnown RBP11.9□□□□□ -0.5
SLIRP-212ENST00000613856 DDX56Q9NY93 547 aaKnown RBP11.9□□□□□ -0.5
SLIRP-212ENST00000613856 GMIPQ9P107 970 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 RNF14Q9UBS8 474 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
SLIRP-212ENST00000613856 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 A0A1W2PQH9 124 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 C8AP07357 584 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 POU2F2P09086 479 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 NCAM1P13591 858 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 TCF4P15884 667 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 TFE3P19532 575 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 PPP3CCP48454 512 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 ATP11AP98196 1134 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 TAF10Q12962 218 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 CDO1Q16878 200 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 DAB2IPQ5VWQ8 1189 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 SYPL2Q5VXT5 272 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 CYP4V2Q6ZWL3 525 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 EXD1Q8NHP7 514 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 SLC7A14Q8TBB6 771 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 DQX1Q8TE96 717 aaKnown RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 COG1Q8WTW3 980 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 TEKT4Q8WW24 435 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 RPP25Q9BUL9 199 aaKnown RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 MAN1C1Q9NR34 630 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 OLA1Q9NTK5 396 aaKnown RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 UXTQ9UBK9 157 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 DPP7Q9UHL4 492 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 TTC7AQ9ULT0 858 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-212ENST00000613856 USP18Q9UMW8 372 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 ACACBO00763 2458 aa11.89□□□□□ -0.51
SLIRP-212ENST00000613856 HELZP42694 1942 aaKnown RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 M0QYT0 321 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 MDM4O15151 490 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 IRAK2O43187 625 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 PRPSAP2O60256 369 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 PAPLNO95428 1278 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 TRUB2O95900 331 aaKnown RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 F9P00740 461 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 LRG1P02750 347 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 SPATA31D3P0C874 917 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 RALAP11233 206 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 IL1R2P27930 398 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 GBP2P32456 591 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 PTPN7P35236 360 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 SSR1P43307 286 aaKnown RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 TUBP50607 506 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 DNA2P51530 1060 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 AIF1P55008 147 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 PITX1P78337 314 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 CKAP4Q07065 602 aaKnown RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 NNTQ13423 1086 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 EIF4EBP2Q13542 120 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 BOLA3Q53S33 107 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 SH3PXD2AQ5TCZ1 1133 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 SEL1L2Q5TEA6 688 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 ELMSAN1Q6PJG2 1045 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 SPATA31D4Q6ZUB0 917 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF572Q7Z3I7 529 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 TAC4Q86UU9 113 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 VSIG1Q86XK7 387 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 CREG2Q8IUH2 290 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 PSTKQ8IV42 348 aaKnown RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 ACTRT1Q8TDG2 376 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 RNF139Q8WU17 664 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 EDEM1Q92611 657 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 RUBCNQ92622 972 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 NTAN1Q96AB6 310 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 RBM41Q96IZ5 413 aaKnown RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 PEBP4Q96S96 227 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 PSMB7Q99436 277 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 FAM204AQ9H8W3 233 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 WDR6Q9NNW5 1121 aaKnown RBP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.88□□□□□ -0.51
SLIRP-212ENST00000613856 OSER1Q9NX31 292 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 CALCOCO1Q9P1Z2 691 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 WNT16Q9UBV4 365 aa11.88□□□□□ -0.51
SLIRP-212ENST00000613856 CCDC195A0A1B0GUA6 201 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 PGRMC1O00264 195 aaKnown RBP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF185O15231 689 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 SRGAP2O75044 1071 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 TADA3O75528 432 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 ZMYND10O75800 440 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 HNRNPA1P09651 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 RARGP13631 454 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 CXCR5P32302 372 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 GBP1P32455 592 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 CXCR3P49682 368 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 PGFP49763 221 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 ATXN1P54253 815 aaKnown RBP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 COPS2P61201 443 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms