RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 NME5P56597 212 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 DUOXA2Q1HG44 320 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 TTYH1Q9H313 450 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 GCLMP48507 274 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 USP46P62068 366 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ERVK-24P63145 666 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 GRTP1Q5TC63 336 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ERAP2Q6P179 960 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 SIRT2Q8IXJ6 389 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 TMEM132CQ8N3T6 1108 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PACRGLQ8N7B6 248 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ITFG1Q8TB96 612 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PYDC1Q8WXC3 89 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 TCEAL7Q9BRU2 100 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 MTG1Q9BT17 334 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 ADPRHL2Q9NX46 363 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PPP1R3GB7ZBB8 358 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 DNAJB5O75953 348 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 NADKO95544 446 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 ACADLP28330 430 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PIK3CGP48736 1102 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 NEK3P51956 506 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PTPN21Q16825 1174 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PADI6Q6TGC4 694 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 FRMD7Q6ZUT3 714 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 AGPAT5Q9NUQ2 364 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 CLN6Q9NWW5 311 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 USPL1Q5W0Q7 1092 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 CREG2Q8IUH2 290 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 PIWIL2Q8TC59 973 aaKnown RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 SRPK1Q96SB4 655 aaKnown RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 CELF4Q9BZC1 486 aaKnown RBP8.98□□□□□ -0.97
TTC28-208ENST00000612946 ZNF222Q9UK12 451 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 IVNS1ABPQ9Y6Y0 642 aa8.98□□□□□ -0.97
TTC28-208ENST00000612946 F8W810 466 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PORP16435 677 aaPredicted RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 CD58P19256 250 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 FASTKQ14296 549 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 MEA1Q16626 185 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 TXNDC11Q6PKC3 985 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 SMYD1Q8NB12 490 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 INTS13Q9NVM9 706 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 NR5A2O00482 541 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ZBTB5O15062 677 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 DGKIO75912 1065 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 TPBGLP0DKB5 382 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 UMPSP11172 480 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ITGA2P17301 1181 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 RORAP35398 523 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 TIE1P35590 1138 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 NFYCQ13952 458 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 LCN1P1Q5VSP4 162 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 RNF19BQ6ZMZ0 732 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 REEP1Q9H902 201 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PADI4Q9UM07 663 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 SYNJ2BP-COX16A0A087WUM0 186 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ASNSP08243 561 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 RHAGQ02094 409 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 TIGD7Q6NT04 549 aaPredicted RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 CXXC5Q7LFL8 322 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 ALLCQ8N6M5 410 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ZNF285Q96NJ3 590 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 EMILIN2Q9BXX0 1053 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 COX16Q9P0S2 106 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 RGSL1A5PLK6 1076 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 IL18RAPO95256 599 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 TPI1P60174 286 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 KCNK18Q7Z418 384 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 SRBD1Q8N5C6 995 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 PJA1Q8NG27 643 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 RHBDF1Q96CC6 855 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 UNKQ9C0B0 810 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 S100A14Q9HCY8 104 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ZSWIM5Q9P217 1185 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 AAR2Q9Y312 384 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 BICRAQ9NZM4 1560 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 CDC40O60508 579 aaKnown RBP eCLIP8.97□□□□□ -0.97
TTC28-208ENST00000612946 TM7SF2O76062 418 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 CBX6O95503 412 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 CERKLQ49MI3 558 aaPredicted RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 DDI2Q5TDH0 399 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 FBXO25Q8TCJ0 367 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 C15orf40Q8WUR7 153 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 HIPK3Q9H422 1215 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.97□□□□□ -0.97
TTC28-208ENST00000612946 IGSF9Q9P2J2 1179 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 NUP50Q9UKX7 468 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 M0QYV0 167 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PGK2P07205 417 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PROSER1Q86XN7 944 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ALDH16A1Q8IZ83 802 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 MYO5BQ9ULV0 1848 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 CENPBD1B2RD01 187 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 H7C2Y5 167 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 TRIM38O00635 465 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PSEN1P49768 467 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 MGAT5Q09328 741 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PHKG1Q16816 387 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ZNF423Q2M1K9 1284 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms