RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 ZSCAN5BA6NJL1 495 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 H3BRB1 525 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ALOX12P18054 663 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PLCG1P19174 1290 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ITGALP20701 1170 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CCNE1P24864 410 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RPA1P27694 616 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BTDP43251 543 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RAB5BP61020 215 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PKN2Q16513 984 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CYP4Z1Q86W10 505 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PRG2P13727 222 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 VARSP26640 1264 aaKnown RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C21orf59P57076 290 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZBED6P86452 979 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PLGLAQ15195 96 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FBXW5Q969U6 566 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MTFMTQ96DP5 389 aaKnown RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 UBXN10Q96LJ8 280 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CIPCQ9C0C6 399 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ARHGEF38Q9NXL2 777 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TPST1O60507 370 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZCCHC18P0CG32 403 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 AVPR1AP37288 418 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 OR1G1P47890 313 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NT5C2P49902 561 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GMFBP60983 142 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 USP17L2Q6R6M4 530 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NECAB2Q7Z6G3 386 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 INVSQ9Y283 1065 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SCN2BO60939 215 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GFPT2O94808 682 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CD53P19397 219 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NR1D1P20393 614 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PTPN7P35236 360 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SLC26A3P40879 764 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TMEM62Q0P6H9 643 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CDH18Q13634 790 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C1DQ13901 141 aaKnown RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CDKL4Q5MAI5 379 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C6orf183Q5T699 404 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BHLHB9Q6PI77 547 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ARMC10Q8N2F6 343 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CSGALNACT1Q8TDX6 532 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GAL3ST1Q99999 423 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ABHD14A-ACY1A0A1B0GW23 586 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ANPEPP15144 967 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ACADSBP45954 432 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MADCAM1Q13477 382 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FAM220AQ7Z4H9 259 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TCEANCQ8N8B7 351 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RIN2Q8WYP3 895 aaPredicted RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PCDHA13Q9Y5I0 950 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CHEK1O14757 476 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GNA14O95837 355 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KCNA5P22460 613 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DSTNP60981 165 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 R3HDM1Q15032 1099 aaKnown RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CENPLQ8N0S6 344 aaPredicted RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 OR2L8Q8NGY9 312 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NAT14Q8WUY8 206 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SENP6Q9GZR1 1112 aaPredicted RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BCAS3Q9H6U6 928 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C10orf88Q9H8K7 445 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 WWOXQ9NZC7 414 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C14orf166Q9Y224 244 aaKnown RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZNF862O60290 1169 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MLLT6P55198 1093 aaPredicted RBP11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SGCGQ13326 291 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SYT15Q9BQS2 421 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RACGAP1Q9H0H5 632 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CST11Q9H112 138 aa11.09□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TTC26A0AVF1 554 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MGAT4DA6NG13 374 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ALBP02768 609 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 IGFALSP35858 605 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TGFBR2P37173 567 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CLK3P49761 638 aaKnown RBP11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 RPP38P78345 283 aaKnown RBP11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 KBTBD12Q3ZCT8 623 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 USPL1Q5W0Q7 1092 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FAM228AQ86W67 206 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HAVCR1Q96D42 359 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF560Q96MR9 790 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF350Q9GZX5 532 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 KANSL2Q9H9L4 492 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 VPS51Q9UID3 782 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 OR10H2O60403 315 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NR2F2P24468 414 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SSX6Q7RTT6 188 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms