RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 GCNAQ96QF7 691 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TWNKQ96RR1 684 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 NRDE2Q9H7Z3 1164 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 CHST12Q9NRB3 414 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PNPOQ9NVS9 261 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC5A4Q9NY91 659 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF214Q9UL59 606 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 A0A096LPK6 155 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 RNF103-CHMP3A0A140T963 221 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CXorf49A8MYA2 514 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 E7ENQ6 273 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PHGDHO43175 533 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TOP3BO95985 862 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 F7P08709 466 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CTSHP09668 335 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 GOT1P17174 413 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 RPS12P25398 132 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PMLP29590 882 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 FDFT1P37268 417 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 GRIA1P42261 906 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 OAZ1P54368 228 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 MPP3Q13368 585 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 BLMHQ13867 455 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TMEM259Q4ZIN3 620 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PPM1JQ5JR12 505 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 VWA5B1Q5TIE3 1220 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 KLC3Q6P597 504 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 LCA5Q86VQ0 697 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 IGDCC3Q8IVU1 814 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 UNC5BQ8IZJ1 945 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PDZD8Q8NEN9 1154 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 OR52K1Q8NGK4 314 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 EDEM1Q92611 657 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 EPAS1Q99814 870 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 EBNA1BP2Q99848 306 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 UPF3AQ9H1J1 476 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 VPS33BQ9H267 617 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ATXN3LQ9H3M9 355 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PCDH18Q9HCL0 1135 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 XPNPEP3Q9NQH7 507 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PDGFCQ9NRA1 345 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PDP2Q9P2J9 529 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 KIAA1257Q9ULG3 409 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CORO1CQ9ULV4 474 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PLA2G4CQ9UP65 541 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 PLLPQ9Y342 182 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 LRP5O75197 1615 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 H3BRB1 525 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 XPO1O14980 1071 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CYP2C9P11712 490 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ETS2P15036 469 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ANPEPP15144 967 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 RAG1P15918 1043 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TFE3P19532 575 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 EEF1B2P24534 225 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 MAP3K7CLP57077 242 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TREML2Q5T2D2 321 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 NAT8LQ8N9F0 302 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 GDPD5Q8WTR4 605 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 MARK4Q96L34 752 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CATSPER2Q96P56 530 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 AP5M1Q9H0R1 490 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TUT1Q9H6E5 874 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 APPL1Q9UKG1 709 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 RUVBL2Q9Y230 463 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CCDC88AQ3V6T2 1871 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TRDMT1O14717 391 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TBX10O75333 385 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ATICP31939 592 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 GP5P40197 560 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 BCAT1P54687 386 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 NME5P56597 212 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TAF12Q16514 161 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CA9Q16790 459 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 GALNTL6Q49A17 601 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 SPDYAQ5MJ70 313 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 MOB2Q70IA6 237 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TDRD5Q8NAT2 981 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC4A11Q8NBS3 891 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 WDR60Q8WVS4 1066 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ANKRD27Q96NW4 1050 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TBCBQ99426 244 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 EBF4Q9BQW3 602 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ZCWPW1Q9H0M4 648 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ASB7Q9H672 318 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 LRRC40Q9H9A6 602 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 TCF7L2Q9NQB0 619 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF212Q9UDV6 495 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 CPSF3Q9UKF6 684 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 VANGL2Q9ULK5 521 aa7.06□□□□□ -1.28
SYNPO2-206ENST00000610556 AP1G2O75843 785 aa7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 MCF2P10911 925 aa7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 CCNB1P14635 433 aa7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 ARF4P18085 180 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 GRK2P25098 689 aa7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 CA8P35219 290 aa7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 ACADSBP45954 432 aa7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 KPNA2P52292 529 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-206ENST00000610556 VGLL4Q14135 290 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms