RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CCDC33Q8N5R6 958 aa13.27□□□□□ -0.29
CD9-212ENST00000610354 TERB1Q8NA31 727 aa13.27□□□□□ -0.29
CD9-212ENST00000610354 ZNF397Q8NF99 534 aaPredicted RBP13.27□□□□□ -0.29
CD9-212ENST00000610354 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.29
CD9-212ENST00000610354 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.29
CD9-212ENST00000610354 OTOGLQ3ZCN5 2332 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 A0A1W2PQC6 194 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 SGK1O00141 431 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 CAPN9O14815 690 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 ACSL4O60488 711 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 HSF2BPO75031 334 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 ADAM23O75077 832 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 ATG13O75143 517 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 DAB1O75553 588 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 LSM8O95777 96 aaKnown RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 LATS1O95835 1130 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 UNGP13051 313 aaPredicted RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 HOXD9P28356 352 aaPredicted RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 HOXA6P31267 233 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 TIE1P35590 1138 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 PBX1P40424 430 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 PXNP49023 591 aaPredicted RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 DGKGP49619 791 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 MRPS21P82921 87 aaKnown RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 ARID5AQ03989 594 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 PTP4A2Q12974 167 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 NNTQ13423 1086 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 DMC1Q14565 340 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 DCAF6Q58WW2 860 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 ADGRF1Q5T601 910 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 E4F1Q66K89 784 aaPredicted RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 RNF43Q68DV7 783 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 SYT13Q7L8C5 426 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 ERICH1Q86X53 443 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 ALLCQ8N6M5 410 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 IL17RCQ8NAC3 791 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 AZIN2Q96A70 460 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 C18orf8Q96DM3 657 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 SERPINB11Q96P15 392 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 NOX5Q96PH1 765 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 PHF12Q96QT6 1004 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
CD9-212ENST00000610354 SYT11Q9BT88 431 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 TTYH3Q9C0H2 523 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 CEP83Q9Y592 693 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 FAM186AA6NE01 2351 aa13.26□□□□□ -0.29
CD9-212ENST00000610354 TBC1D3BA6NDS4 549 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 PRR23AA6NEV1 266 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 HRO43593 1189 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 KLF8O95600 359 aaPredicted RBP13.25□□□□□ -0.29
CD9-212ENST00000610354 SRSF5Q13243 272 aaKnown RBP13.25□□□□□ -0.29
CD9-212ENST00000610354 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 MPPE1Q53F39 396 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 C10orf76Q5T2E6 689 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 PIK3R6Q5UE93 754 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 EGFLAMQ63HQ2 1017 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 NUGGCQ68CJ6 796 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 HEATR6Q6AI08 1181 aaKnown RBP13.25□□□□□ -0.29
CD9-212ENST00000610354 PHLDB2Q86SQ0 1253 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 UNC45BQ8IWX7 931 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 SUMF1Q8NBK3 374 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 SLC30A5Q8TAD4 765 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 WFDC5Q8TCV5 224 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
CD9-212ENST00000610354 PRICKLE1Q96MT3 831 aaPredicted RBP13.25□□□□□ -0.29
CD9-212ENST00000610354 HHIPQ96QV1 700 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 ACOX2Q99424 681 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 FAM126AQ9BYI3 521 aaPredicted RBP13.25□□□□□ -0.29
CD9-212ENST00000610354 NUCKS1Q9H1E3 243 aaKnown RBP13.25□□□□□ -0.29
CD9-212ENST00000610354 SYNCQ9H7C4 482 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 TMEM59LQ9UK28 342 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 MMP17Q9ULZ9 603 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 SLC27A6Q9Y2P4 619 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 STARD13Q9Y3M8 1113 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
CD9-212ENST00000610354 SDK1Q7Z5N4 2213 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 KCNU1A8MYU2 1149 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 I6L893 689 aaPredicted RBP13.24□□□□□ -0.29
CD9-212ENST00000610354 SERPINC1P01008 464 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 MMP8P22894 467 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 NOS2P35228 1153 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 FLT3P36888 993 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 SCNN1AP37088 669 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 RNASE9P60153 205 aaKnown RBP13.24□□□□□ -0.29
CD9-212ENST00000610354 CDK17Q00537 523 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 CLEC16AQ2KHT3 1053 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 FILIP1LQ4L180 1135 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 TMEM215Q68D42 235 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 MMS22LQ6ZRQ5 1243 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 WDR5BQ86VZ2 330 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 ZDHHC17Q8IUH5 632 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 TXNDC5Q8NBS9 432 aaKnown RBP13.24□□□□□ -0.29
CD9-212ENST00000610354 DDI1Q8WTU0 396 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 NKD2Q969F2 451 aaPredicted RBP13.24□□□□□ -0.29
CD9-212ENST00000610354 NT5C3BQ969T7 300 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 TMA16Q96EY4 203 aaKnown RBP13.24□□□□□ -0.29
CD9-212ENST00000610354 LMLNQ96KR4 655 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms