RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 RITA1Q96K30 269 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 PAGR1Q9BTK6 254 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 GATA5Q9BWX5 397 aaPredicted RBP4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 TWSG1Q9GZX9 223 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 CDCP1Q9H5V8 836 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 SAGE1Q9NXZ1 904 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 RAB21Q9UL25 225 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 RCE1Q9Y256 329 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 TISP43B9A030 160 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 PRYO14603 147 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 CYP3A4P08684 503 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 GPD1P21695 349 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 DUSP1P28562 367 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 THBS4P35443 961 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 SF3A3Q12874 501 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 PPFIA1Q13136 1202 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 MFSD13AQ14CX5 517 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 LARS2Q15031 903 aaKnown RBP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 FBXO42Q6P3S6 717 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 CHSY1Q86X52 802 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 DNAJC10Q8IXB1 793 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 OR52L2PQ8NGH6 319 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 SPPL3Q8TCT6 385 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 HMGB4Q8WW32 186 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 LTV1Q96GA3 475 aaPredicted RBP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 TRAPPC9Q96Q05 1148 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 EIF3CQ99613 913 aaKnown RBP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 FAM167BQ9BTA0 163 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 CINPQ9BW66 212 aaPredicted RBP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 ARHGAP39Q9C0H5 1083 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 CCDC134Q9H6E4 229 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 ELAC1Q9H777 363 aaKnown RBP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 FBXO28Q9NVF7 368 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 ZNHIT2Q9UHR6 403 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 KCND3Q9UK17 655 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 FEM1BQ9UK73 627 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 C19orf53Q9UNZ5 99 aaPredicted RBP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 UBE2J1Q9Y385 318 aaPredicted RBP4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 WNT6Q9Y6F9 365 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 SPATA31A1Q5TZJ5 1347 aa4.45□□□□□ -1.7
RNU6-88P-201ENST00000606801 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 WIPF3A6NGB9 483 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 HMX3A6NHT5 357 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 PROP1O75360 226 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 HEXIM1O94992 359 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 AGTR2P50052 363 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 SLC14A1Q13336 389 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 SEC23BQ15437 767 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 SMAD1Q15797 465 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 C4orf46Q504U0 113 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 DENND2CQ68D51 928 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 ANKRD40Q6AI12 368 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 DCDC5Q6ZRR9 648 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 RAB11FIP2Q7L804 512 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 KRT27Q7Z3Y8 459 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 FTSJ3Q8IY81 847 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 EXD3Q8N9H8 876 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 BOLLQ8N9W6 283 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 NGDNQ8NEJ9 315 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 OR6Y1Q8NGX8 325 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 ADAMTS18Q8TE60 1221 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 PNISRQ8TF01 805 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 CLEC4CQ8WTT0 213 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 REXO5Q96IC2 774 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 TAF1DQ9H5J8 278 aaPredicted RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 SEPSECSQ9HD40 501 aaKnown RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 MLXIPLQ9NP71 852 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 KIF17Q9P2E2 1029 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 TRPC5Q9UL62 973 aaPredicted RBP4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 SLC12A4Q9UP95 1085 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 B3GNT3Q9Y2A9 372 aa4.44□□□□□ -1.7
RNU6-88P-201ENST00000606801 EFCAB8A8MWE9 144 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 BTBD19C9JJ37 291 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 E7EVH7 732 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 POC1B-GALNT4F8VUJ3 575 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 SMIM22K7EJ46 135 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 CREB3O43889 395 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 LARGE1O95461 756 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 NUDT3O95989 172 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 CKMT1AP12532 417 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 IGFBP2P18065 325 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 MATN1P21941 496 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 SERPINA4P29622 427 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 STAT6P42226 847 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 ZNF84P51523 738 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 WDR5P61964 334 aaKnown RBP4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 RBM6P78332 1123 aaKnown RBP4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 DCTN1Q14203 1278 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 FCRLBQ6BAA4 426 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 RASGRP2Q7LDG7 609 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 TFAP2DQ7Z6R9 452 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 LAS2Q8IYD9 372 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 GALNT4Q8N4A0 578 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 ZNF398Q8TD17 642 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 C3orf49Q96BT1 292 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 SDCCAG3Q96C92 435 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 CCDC17Q96LX7 622 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 SCLT1Q96NL6 688 aa4.43□□□□□ -1.7
RNU6-88P-201ENST00000606801 CRAMP1Q96RY5 1269 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms