RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 CISD3P0C7P0 127 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 HNRNPLP14866 589 aaKnown RBP eCLIP12.01□□□□□ -0.493e-8■■■■■ 39.8
CCDC12-209ENST00000604164 CDH5P33151 784 aaPredicted RBP12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SOX5P35711 763 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SCNN1AP37088 669 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 ZNF165P49910 485 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 DMWDQ09019 674 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SYCP1Q15431 976 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 ELF2Q15723 593 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SKOR2Q2VWA4 1001 aaPredicted RBP12.01□□□□□ -0.49
CCDC12-209ENST00000604164 DCAF6Q58WW2 860 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 OR6B2Q6IFH4 312 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 TRIM72Q6ZMU5 477 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 ERICH1Q86X53 443 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 CHPFQ8IZ52 775 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 WDTC1Q8N5D0 677 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 ATP6V0D2Q8N8Y2 350 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 WFIKKN2Q8TEU8 576 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 LOXL4Q96JB6 756 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 BTN2A3PQ96KV6 586 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SPACA7Q96KW9 195 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SLC2A13Q96QE2 648 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 GANQ9H2C0 597 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 FAM204AQ9H8W3 233 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC12-209ENST00000604164 BCCIPQ9P287 314 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SIK3Q9Y2K2 1263 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 SGK1O00141 431 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 RHOBTB1O94844 696 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 TRUB2O95900 331 aaKnown RBP12□□□□□ -0.49
CCDC12-209ENST00000604164 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
CCDC12-209ENST00000604164 HOXB2P14652 356 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 ABCB4P21439 1286 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 CCR1P32246 355 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 PXNP49023 591 aaPredicted RBP12□□□□□ -0.49
CCDC12-209ENST00000604164 SLC6A3Q01959 620 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 MESP2Q0VG99 397 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 STARD3Q14849 445 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 NCAPHQ15003 741 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 ACBD5Q5T8D3 534 aaPredicted RBP12□□□□□ -0.49
CCDC12-209ENST00000604164 EMC10Q5UCC4 262 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 ANO7Q6IWH7 933 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 TAC4Q86UU9 113 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 RASSF3Q86WH2 238 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 HJURPQ8NCD3 748 aaPredicted RBP12□□□□□ -0.49
CCDC12-209ENST00000604164 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
CCDC12-209ENST00000604164 EPS8L1Q8TE68 723 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 RNF34Q969K3 372 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 C18orf8Q96DM3 657 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 SLC39A13Q96H72 371 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 FCRL2Q96LA5 508 aaPredicted RBP12□□□□□ -0.49
CCDC12-209ENST00000604164 TJP2Q9UDY2 1190 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 STAP1Q9ULZ2 295 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 KIAA1549LQ6ZVL6 1849 aa12□□□□□ -0.49
CCDC12-209ENST00000604164 TSPAN3O60637 253 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 DAB1O75553 588 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 GFPT2O94808 682 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 F9P00740 461 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 IGLV3-25P01717 112 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 ERBB2P04626 1255 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 ATP5BP06576 529 aaKnown RBP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 SDHBP21912 280 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 HOXD9P28356 352 aaPredicted RBP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 NOS2P35228 1153 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 MATKP42679 507 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 GABRB2P47870 512 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 JAM2P57087 298 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 CDR2Q01850 454 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 PTPN20Q4JDL3 420 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 PIK3R6Q5UE93 754 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 TTC39BQ5VTQ0 682 aaPredicted RBP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 TAF3Q5VWG9 929 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 SYPL2Q5VXT5 272 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 OLFML1Q6UWY5 402 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 FAM183BPQ6ZVS7 135 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 SND1Q7KZF4 910 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 NOP9Q86U38 636 aaKnown RBP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 SFTPA1Q8IWL2 248 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 DEFB106AQ8N104 65 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 AHI1Q8N157 1196 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 PGBD3Q8N328 593 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 DDX1Q92499 740 aaKnown RBP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 PIWIL1Q96J94 861 aaKnown RBP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 ZC3H10Q96K80 434 aaKnown RBP11.99□□□□□ -0.49
CCDC12-209ENST00000604164 GABRG3Q99928 467 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 NLRC4Q9NPP4 1024 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 DDIT4Q9NX09 232 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 ELOVL2Q9NXB9 296 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 MYO6Q9UM54 1294 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 PLA2G4CQ9UP65 541 aa11.99□□□□□ -0.49
CCDC12-209ENST00000604164 MYOFQ9NZM1 2061 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 TCRBV21S2A2A0A5A6 115 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 PRRT4C9JH25 899 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 F5H5T6 163 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 TRIM24O15164 1050 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 SYNCRIPO60506 623 aaKnown RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 TBL1XO60907 577 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 ADAM23O75077 832 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms