RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 CCR1P32246 355 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 OR1D2P34982 312 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 GPR15P49685 360 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 DUSP4Q13115 394 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 PAFAH1B3Q15102 231 aaKnown RBP23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 NCBP2-AS2Q69YL0 99 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 RELL1Q8IUW5 271 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 UNC45BQ8IWX7 931 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ZNF276Q8N554 614 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 GOLGA6L1Q8N7Z2 621 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ZNF461Q8TAF7 563 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ZIM3Q96PE6 472 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 SEPT5Q99719 369 aaPredicted RBP23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 EPAS1Q99814 870 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 SLC27A5Q9Y2P5 690 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ATP8A1Q9Y2Q0 1164 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 WDR27A2RRH5 827 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ABLIM3O94929 683 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ACTN2P35609 894 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 GGCXP38435 758 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 VPS41P49754 854 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 EIF3BP55884 814 aaKnown RBP23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 CREMQ03060 361 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 FAM117BQ6P1L5 589 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ZC3H18Q86VM9 953 aaKnown RBP23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 HOOK3Q86VS8 718 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 TTC9BQ8N6N2 239 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 UBLCP1Q8WVY7 318 aaPredicted RBP23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 DPF3Q92784 378 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 FBXO32Q969P5 355 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 SH3GL2Q99962 352 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 CLSTN3Q9BQT9 956 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 TTLL2Q9BWV7 592 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 MAGEB5Q9BZ81 275 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 ADAM7Q9H2U9 754 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 USP29Q9HBJ7 922 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 SHOC2Q9UQ13 582 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 PCDHB12Q9Y5F1 795 aa23.04■■□□□ 1.28
PPFIA3-211ENST00000602848 CREB3O43889 395 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 RPL22P35268 128 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 TPI1P60174 286 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 HTRA4P83105 476 aaPredicted RBP23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 FPGSQ05932 587 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 MTA1Q13330 715 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 UAP1Q16222 522 aaPredicted RBP23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 SLC45A4Q5BKX6 768 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 ACBD5Q5T8D3 534 aaPredicted RBP23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 SDHAF4Q5VUM1 108 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 ZCCHC9Q8N567 271 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 FAM71DQ8N9W8 422 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 GLIS1Q8NBF1 620 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 OVCA2Q8WZ82 227 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 FERMT1Q9BQL6 677 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 PHACTR1Q9C0D0 580 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 PAK5Q9P286 719 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 OR12D3Q9UGF7 316 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 TLR6Q9Y2C9 796 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 SSX2IPQ9Y2D8 614 aa23.03■■□□□ 1.28
PPFIA3-211ENST00000602848 SLC38A8A6NNN8 435 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 DCLK1O15075 740 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 NCAM2O15394 837 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 ZSCAN5DPP0CG00 497 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 USP46P62068 366 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 RNASEH2BQ5TBB1 312 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 C16orf59Q7L2K0 433 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 PPIL6Q8IXY8 311 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 CASP10Q92851 521 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 QKIQ96PU8 341 aaKnown RBP eCLIP23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 CDK5RAP1Q96SZ6 601 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 BRD8Q9H0E9 1235 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 CRISPLD1Q9H336 500 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 DTLQ9NZJ0 730 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 GMIPQ9P107 970 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 PLAAQ9Y263 795 aa23.02■■□□□ 1.28
PPFIA3-211ENST00000602848 SYF2O95926 243 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 URODP06132 367 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 ZDHHC11BP0C7U3 371 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 ETS1P14921 441 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 OAS2P29728 719 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 GDF10P55107 478 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 NRG1Q02297 640 aaPredicted RBP23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 GBE1Q04446 702 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 RAB33AQ14088 237 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 PDK1Q15118 436 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 KCTD19Q17RG1 926 aaPredicted RBP23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 OTOP2Q7RTS6 562 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 CROCCP2Q86T23 111 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 PDZD8Q8NEN9 1154 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 C1orf74Q96LT6 269 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 OLFM3Q96PB7 478 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 UBE2OQ9C0C9 1292 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 ANLNQ9NQW6 1124 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 TMPRSS4Q9NRS4 437 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 FNIP2Q9P278 1114 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 MYO16Q9Y6X6 1858 aa23.01■■□□□ 1.27
PPFIA3-211ENST00000602848 KCNU1A8MYU2 1149 aa23■■□□□ 1.27
PPFIA3-211ENST00000602848 GOLGA8KD6RF30 607 aa23■■□□□ 1.27
PPFIA3-211ENST00000602848 ADAM12O43184 909 aa23■■□□□ 1.27
PPFIA3-211ENST00000602848 GJB5O95377 273 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms