RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 DESP17661 470 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 L1CAMP32004 1257 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 PTPN7P35236 360 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 CXCR3P49682 368 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 GPM6BQ13491 265 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 KRT81Q14533 505 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 ZNF638Q14966 1978 aaKnown RBP17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 DPYSL2Q16555 572 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 BOLA3Q53S33 107 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 TFDP3Q5H9I0 405 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 FAM72AQ5TYM5 149 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 TTC19Q6DKK2 380 aaPredicted RBP17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 FAM72DQ6L9T8 149 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 ADGRD2Q7Z7M1 963 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 FAM72BQ86X60 149 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 SLC22A17Q8WUG5 538 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 SAE1Q9UBE0 346 aaPredicted RBP17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 XPO7Q9UIA9 1087 aaKnown RBP17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 RB1P06400 928 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 C8AP07357 584 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 CLCN4P51793 760 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 UBE3AQ05086 875 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 EFEMP1Q12805 493 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 PPP2R5EQ16537 467 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 ODF2Q5BJF6 829 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 MSANTD2Q6P1R3 559 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 LRIG3Q6UXM1 1119 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 TMEM150AQ86TG1 271 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 ARNTL2Q8WYA1 636 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 EMILIN2Q9BXX0 1053 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 TLR8Q9NR97 1041 aaKnown RBP17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 RRN3Q9NYV6 651 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 PLAAQ9Y263 795 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 MFHAS1Q9Y4C4 1052 aa17.98■□□□□ 0.47
PPFIA3-207ENST00000602716 H3BNC9 293 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 PER2O15055 1255 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 GLUD1P00367 558 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 CSH1P0DML2 217 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 CSH2P0DML3 217 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 EPCAMP16422 314 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 HLTFQ14527 1009 aaKnown RBP eCLIP17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 SKIDA1Q1XH10 827 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 DNAJB7Q7Z6W7 309 aaPredicted RBP17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 MIB1Q86YT6 1006 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 PQLC3Q8N755 202 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 RNF139Q8WU17 664 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 ATP6V1G3Q96LB4 118 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 ZNF512Q96ME7 567 aaPredicted RBP17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 NAP1L3Q99457 506 aaPredicted RBP17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 FAM107BQ9H098 131 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 SLITRK6Q9H5Y7 841 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 AMACRQ9UHK6 382 aa17.97■□□□□ 0.47
PPFIA3-207ENST00000602716 HMGB1P1B2RPK0 211 aaPredicted RBP17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 ANKRD65E5RJM6 399 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 EBAG9O00559 213 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 TLR5O60602 858 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 PHF2O75151 1096 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 PECAM1P16284 738 aaPredicted RBP17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 GOT1P17174 413 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 NR1D1P20393 614 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 ADRA1BP35368 520 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 HSD17B3P37058 310 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 KCNJ1P48048 391 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 ATP1A2P50993 1020 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 COPS2P61201 443 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 SNX1Q13596 522 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 C10orf120Q5SQS8 335 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 PPP2R2DQ66LE6 453 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 NPNTQ6UXI9 565 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 RFX6Q8HWS3 928 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 HS6ST3Q8IZP7 471 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 ARHGAP18Q8N392 663 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 PCDH19Q8TAB3 1148 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 PSMG2Q969U7 264 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 MYRFLQ96LU7 910 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 TRIM62Q9BVG3 475 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 TKTL2Q9H0I9 626 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 IL21Q9HBE4 155 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 COMMD8Q9NX08 183 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 CLIC5Q9NZA1 410 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 RASAL2Q9UJF2 1139 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 ATG2AQ2TAZ0 1938 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 MYO7AQ13402 2215 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 ZNF840PA6NDX5 716 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 RFXAPO00287 272 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 CST8O60676 142 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 RFPL2O75678 378 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 VEPH1Q14D04 833 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 UAP1Q16222 522 aaPredicted RBP17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 DDX42Q86XP3 938 aaKnown RBP eCLIP17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 NTAN1Q96AB6 310 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 FCRL2Q96LA5 508 aaPredicted RBP17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 CEP295NLQ96MC4 621 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 CSPG4P5Q96PW8 444 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 DCLK3Q9C098 648 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 NEUROG2Q9H2A3 272 aa17.96■□□□□ 0.47
PPFIA3-207ENST00000602716 ETNK2Q9NVF9 386 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms