RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PPP1R7Q15435 360 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 HECTD3Q5T447 861 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 SLC9A4Q6AI14 798 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 SYDE1Q6ZW31 735 aaPredicted RBP18.64■□□□□ 0.57
VRK3-225ENST00000601912 ELMOD1Q8N336 334 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 PQLC3Q8N755 202 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 ACTL9Q8TC94 416 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 EPAS1Q99814 870 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 FAM118BQ9BPY3 351 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 HINFPQ9BQA5 517 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 MAGEB5Q9BZ81 275 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 NACA2Q9H009 215 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 OSBPL2Q9H1P3 480 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 ANLNQ9NQW6 1124 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 OR12D3Q9UGF7 316 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 SLC12A6Q9UHW9 1150 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 ZNF148Q9UQR1 794 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 DRG1Q9Y295 367 aaKnown RBP18.64■□□□□ 0.57
VRK3-225ENST00000601912 CCDC151A5D8V7 595 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 TBX18O95935 607 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 C1RP00736 705 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 C8AP07357 584 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 ATP5C1P36542 298 aaKnown RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 HCAR3P49019 387 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 VCPP55072 806 aaKnown RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 GPM6BQ13491 265 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 TRIP4Q15650 581 aaPredicted RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 RTL10Q7L3V2 364 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 MIB1Q86YT6 1006 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 PLD5Q8N7P1 536 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 NKD2Q969F2 451 aaPredicted RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 GDF15Q99988 308 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 CCSER2Q9H7U1 834 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 GDF3Q9NR23 364 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 SAE1Q9UBE0 346 aaPredicted RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 MSRAQ9UJ68 235 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 DNMT3LQ9UJW3 386 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 DNPEPQ9ULA0 475 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 H3BNC9 293 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 MCF2LO15068 1137 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 APOEP02649 317 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 H2AFXP16104 143 aaPredicted RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 TUBP50607 506 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 TPI1P60174 286 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 MTA1Q13330 715 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 RAB30Q15771 203 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 PABPC1LQ4VXU2 614 aaKnown RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 KLHDC10Q6PID8 442 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 C1orf228Q6PIY5 440 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 RFX8Q6ZV50 586 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 GSTA5Q7RTV2 222 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 SLC35B2Q8TB61 432 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 SLC39A13Q96H72 371 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 ERP44Q9BS26 406 aa18.63■□□□□ 0.57
VRK3-225ENST00000601912 YBX2Q9Y2T7 364 aaKnown RBP18.63■□□□□ 0.57
VRK3-225ENST00000601912 SLC12A8A0AV02 714 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 KCNU1A8MYU2 1149 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 I6L893 689 aaPredicted RBP18.62■□□□□ 0.57
VRK3-225ENST00000601912 PAGE1O75459 146 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 ITGAVP06756 1048 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 AMPD1P23109 780 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 TNFRSF8P28908 595 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 NR2C2P49116 596 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 CLCN4P51793 760 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 EIF3EP60228 445 aaKnown RBP18.62■□□□□ 0.57
VRK3-225ENST00000601912 SEMA3BQ13214 749 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 MAP9Q49MG5 647 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 FBXO38Q6PIJ6 1188 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 CCNI2Q6ZMN8 369 aaPredicted RBP18.62■□□□□ 0.57
VRK3-225ENST00000601912 BZW1Q7L1Q6 419 aaKnown RBP18.62■□□□□ 0.57
VRK3-225ENST00000601912 TRIM51Q9BSJ1 452 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 ARHGEF4Q9NR80 690 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 HBS1LQ9Y450 684 aaKnown RBP18.62■□□□□ 0.57
VRK3-225ENST00000601912 HEY1Q9Y5J3 304 aa18.62■□□□□ 0.57
VRK3-225ENST00000601912 ZSCAN5CA6NGD5 496 aaPredicted RBP18.61■□□□□ 0.57
VRK3-225ENST00000601912 PECAM1P16284 738 aaPredicted RBP18.61■□□□□ 0.57
VRK3-225ENST00000601912 HTR7P34969 479 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 IRS1P35568 1242 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 RING1Q06587 406 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 CUL1Q13616 776 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 CAMK1Q14012 370 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 NOMO1Q15155 1222 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 PPM1LQ5SGD2 360 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 ATP6V0D2Q8N8Y2 350 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 IFT81Q8WYA0 676 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 FCRL2Q96LA5 508 aaPredicted RBP18.61■□□□□ 0.57
VRK3-225ENST00000601912 PBX4Q9BYU1 374 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 SIK2Q9H0K1 926 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 FAM114A2Q9NRY5 505 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 CEP290O15078 2479 aa18.61■□□□□ 0.57
VRK3-225ENST00000601912 ESYT3A0FGR9 886 aa18.6■□□□□ 0.57
VRK3-225ENST00000601912 FAM72CH0Y354 149 aa18.6■□□□□ 0.57
VRK3-225ENST00000601912 MOCS2O96007 188 aaPredicted RBP18.6■□□□□ 0.57
VRK3-225ENST00000601912 PBX2P40425 430 aa18.6■□□□□ 0.57
VRK3-225ENST00000601912 DPYSQ14117 519 aa18.6■□□□□ 0.57
VRK3-225ENST00000601912 OASLQ15646 514 aaKnown RBP18.6■□□□□ 0.57
VRK3-225ENST00000601912 ACBD5Q5T8D3 534 aaPredicted RBP18.6■□□□□ 0.57
VRK3-225ENST00000601912 FAM72AQ5TYM5 149 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms