RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 ADAM33Q9BZ11 813 aa18.21■□□□□ 0.51
IRF3-230ENST00000601809 IRX2Q9BZI1 471 aaPredicted RBP18.21■□□□□ 0.51
IRF3-230ENST00000601809 PLXND1Q9Y4D7 1925 aa18.21■□□□□ 0.51
IRF3-230ENST00000601809 TEX33O43247 280 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 ACSL4O60488 711 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 KLF8O95600 359 aaPredicted RBP18.2■□□□□ 0.5
IRF3-230ENST00000601809 APBB3O95704 486 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 TPM2P07951 284 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 SOX5P35711 763 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 ZNF165P49910 485 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 FMO1Q01740 532 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 UBXN1Q04323 297 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 GEN1Q17RS7 908 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 PIK3R6Q5UE93 754 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 EGFLAMQ63HQ2 1017 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 NUGGCQ68CJ6 796 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 TMEM215Q68D42 235 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 KIAA0907Q7Z7F0 614 aaPredicted RBP18.2■□□□□ 0.5
IRF3-230ENST00000601809 UNC45BQ8IWX7 931 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 TMEM35BQ8NCS4 154 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 OLIG1Q8TAK6 271 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 SLC20A1Q8WUM9 679 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 LMLNQ96KR4 655 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 PRICKLE1Q96MT3 831 aaPredicted RBP18.2■□□□□ 0.5
IRF3-230ENST00000601809 ACOX2Q99424 681 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 TRIM62Q9BVG3 475 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 SLC2A11Q9BYW1 496 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 NAT10Q9H0A0 1025 aaKnown RBP18.2■□□□□ 0.5
IRF3-230ENST00000601809 NLRC4Q9NPP4 1024 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
IRF3-230ENST00000601809 CALCOCO1Q9P1Z2 691 aa18.2■□□□□ 0.5
IRF3-230ENST00000601809 GOLGA6L7A0A1B0GV03 622 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 SYCE3A1L190 88 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 HSF2BPO75031 334 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 GFPT2O94808 682 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 LSM8O95777 96 aaKnown RBP18.19■□□□□ 0.5
IRF3-230ENST00000601809 TRUB2O95900 331 aaKnown RBP18.19■□□□□ 0.5
IRF3-230ENST00000601809 CYP1A1P04798 512 aaPredicted RBP18.19■□□□□ 0.5
IRF3-230ENST00000601809 TGM1P22735 817 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 PTPRZ1P23471 2315 aaPredicted RBP18.19■□□□□ 0.5
IRF3-230ENST00000601809 SCNN1AP37088 669 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 ZNF445P59923 1031 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 SLC6A3Q01959 620 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 ENPP2Q13822 863 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 MPPE1Q53F39 396 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 EFHC1Q5JVL4 640 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 TAF3Q5VWG9 929 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 ZNF677Q86XU0 584 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 XYLT1Q86Y38 959 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 DEFB106AQ8N104 65 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.19■□□□□ 0.5
IRF3-230ENST00000601809 ZNF513Q8N8E2 541 aaPredicted RBP18.19■□□□□ 0.5
IRF3-230ENST00000601809 ANKRD20A12PQ8NF67 263 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 GAB3Q8WWW8 586 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 NOX5Q96PH1 765 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 GABRG3Q99928 467 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 XPO7Q9UIA9 1087 aaKnown RBP18.19■□□□□ 0.5
IRF3-230ENST00000601809 DCHS1Q96JQ0 3298 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 SPAG17Q6Q759 2223 aa18.19■□□□□ 0.5
IRF3-230ENST00000601809 A0A1W2PQF6 199 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 SMTNL1A8MU46 457 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 AXIN1O15169 862 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 TSPAN3O60637 253 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 DAB1O75553 588 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 CDK11BP21127 795 aaKnown RBP18.18■□□□□ 0.5
IRF3-230ENST00000601809 DGKEP52429 567 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 CDR2Q01850 454 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 MPP7Q5T2T1 576 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 RFWD3Q6PCD5 774 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 ZDHHC17Q8IUH5 632 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 WFDC5Q8TCV5 224 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 NT5C3BQ969T7 300 aa18.18■□□□□ 0.5
IRF3-230ENST00000601809 CKAP5Q14008 2032 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 A0A1B0GTH6 734 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 KCNU1A8MYU2 1149 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 CAPN9O14815 690 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 GRAP2O75791 330 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 CYBBP04839 570 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 HLA-FP30511 346 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 DCAF6Q58WW2 860 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 ZC3H12AQ5D1E8 599 aaKnown RBP18.17■□□□□ 0.5
IRF3-230ENST00000601809 EOGTQ5NDL2 527 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 OR6B2Q6IFH4 312 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 TRNP1Q6NT89 227 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 BNIPLQ7Z465 357 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 DCLK2Q8N568 766 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 MDGA1Q8NFP4 955 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 TSTD1Q8NFU3 115 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 NEK11Q8NG66 645 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 DDI1Q8WTU0 396 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 BAP1Q92560 729 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 RUBCNQ92622 972 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 TMA16Q96EY4 203 aaKnown RBP18.17■□□□□ 0.5
IRF3-230ENST00000601809 NAP1L5Q96NT1 182 aaPredicted RBP18.17■□□□□ 0.5
IRF3-230ENST00000601809 PCDHB18PQ96TA0 734 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 NPY6RQ99463 290 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 PRMT1Q99873 361 aaKnown RBP18.17■□□□□ 0.5
IRF3-230ENST00000601809 SYT11Q9BT88 431 aa18.17■□□□□ 0.5
IRF3-230ENST00000601809 NUCKS1Q9H1E3 243 aaKnown RBP18.17■□□□□ 0.5
IRF3-230ENST00000601809 CBX8Q9HC52 389 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms