RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SERPINB9P50453 376 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 THOC5Q13769 683 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 TTLL12Q14166 644 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 ANKRD13AQ8IZ07 590 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 HTR3CQ8WXA8 447 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 ZNF333Q96JL9 665 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 FAM161BQ96MY7 647 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 TUT1Q9H6E5 874 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 NEBLO76041 1014 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 ACADSP16219 412 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 LMO2P25791 158 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 HOXA11P31270 313 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 STX3Q13277 289 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 GRIK4Q16099 956 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 FAM131BQ86XD5 332 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 TFB1MQ8WVM0 346 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 SNX27Q96L92 541 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 RILPQ96NA2 401 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 CORO1CQ9ULV4 474 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 KCNH4Q9UQ05 1017 aa20.86■□□□□ 0.93
SHKBP1-225ENST00000600733 ZNF638Q14966 1978 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 GSRP00390 522 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 CYP2C8P10632 490 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 ERFP50548 548 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 SNX16P57768 344 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 SESN2P58004 480 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 BST2Q10589 180 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 BSPRYQ5W0U4 402 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 PPP1R13LQ8WUF5 828 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 NDRG1Q92597 394 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 STMN2Q93045 179 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 OPTNQ96CV9 577 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 CLPTM1LQ96KA5 538 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 USP3Q9Y6I4 520 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 A0A0A0MRY4 1105 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 BIRC5O15392 142 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 LYPLA1O75608 230 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 ALDOAP04075 364 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 SLC34A1Q06495 639 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 UBAP2LQ14157 1087 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 ZBTB6Q15916 424 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 FASTKD1Q53R41 847 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 CMPK2Q5EBM0 449 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 ZNF618Q5T7W0 954 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 ARHGAP17Q68EM7 881 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 TMPRSS6Q8IU80 811 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 SPATA13Q96N96 652 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 OLFM3Q96PB7 478 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 TMPRSS4Q9NRS4 437 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 IL1RAPL1Q9NZN1 696 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 ZFATQ9P243 1243 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 EMCNQ9ULC0 261 aa20.85■□□□□ 0.93
SHKBP1-225ENST00000600733 COL1A2P08123 1366 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 A6NHS1 94 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 PRR5-ARHGAP8B1AHC4 643 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 ITM2AO43736 263 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 MFSD11O43934 449 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 DGKIO75912 1065 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 ARHGAP8P85298 464 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 TIFABQ6ZNK6 161 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 LRRC74BQ6ZQY2 392 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 LMNTD2Q8IXW0 634 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 ANKRD52Q8NB46 1076 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 PPP1R14CQ8TAE6 165 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 RAB3IL1Q8TBN0 382 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 KBTBD7Q8WVZ9 684 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 CCDC106Q9BWC9 280 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 GTF2IRD1Q9UHL9 959 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 PSAT1Q9Y617 370 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 WASF2Q9Y6W5 498 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 TPP1O14773 563 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 ALDH1A2O94788 518 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 KCNA4P22459 653 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 MGAT1P26572 445 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 GCKP35557 465 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 BCAT1P54687 386 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 RPL10AP62906 217 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 DCAF4L1Q3SXM0 396 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 C9orf57Q5W0N0 161 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 STEAP4Q687X5 459 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 UNC93AQ86WB7 457 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 COLGALT1Q8NBJ5 622 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 SCG3Q8WXD2 468 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 ZNF778Q96MU6 729 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 APOL6Q9BWW8 343 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 FAM49AQ9H0Q0 323 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 NXF3Q9H4D5 531 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 PLEKHA5Q9HAU0 1116 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 THAP1Q9NVV9 213 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 TAGLN3Q9UI15 199 aa20.84■□□□□ 0.93
SHKBP1-225ENST00000600733 RAP1GDS1P52306 607 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 SARNPP82979 210 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 NIPAL4Q0D2K0 466 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 PPIL2Q13356 520 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 PDE1CQ14123 709 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 N4BP2L1Q5TBK1 243 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 MBLAC2Q68D91 279 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 ARCQ7LC44 396 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms