RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 MCM9Q9NXL9 1143 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 ASTN2O75129 1339 aaPredicted RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 CCDC195A0A1B0GUA6 201 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 SDR42E2A6NKP2 422 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 INO80B-WBP1J3KQ70 363 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 RRM2P31350 389 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 CBX5P45973 191 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 BST1Q10588 318 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 DALRD3Q5D0E6 543 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 CCBE1Q6UXH8 406 aaPredicted RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 ANKRD49Q8WVL7 239 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 VPS33AQ96AX1 596 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 ZNF597Q96LX8 424 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 NARFLQ9H6Q4 476 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 COQ10BQ9H8M1 238 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 DDX28Q9NUL7 540 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 PTBP2Q9UKA9 531 aaKnown RBP10.13□□□□□ -0.79
NFKB1-212ENST00000600343 CNTNAP5Q8WYK1 1306 aa10.13□□□□□ -0.79
NFKB1-212ENST00000600343 A0A1W2PQ72 361 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 TRIM64BA6NI03 449 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ATP6V1G2-DDX39BF2Z307 99 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 KLF11O14901 512 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 GH2P01242 217 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 OR52Z1P0C646 297 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 RPL17P18621 184 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 IFITM3Q01628 133 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 CLCQ05315 142 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 IKQ13123 557 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PDIA6Q15084 440 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 MGAT5BQ3V5L5 792 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 IQSEC1Q6DN90 963 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 LYPD8Q6UX82 237 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 UNC5AQ6ZN44 842 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 LILRB2Q8N423 598 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 FAM109AQ8N4B1 249 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ZSWIM2Q8NEG5 633 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ABHD11Q8NFV4 315 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ZNF560Q96MR9 790 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 RAD21L1Q9H4I0 556 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PARVAQ9NVD7 372 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 GCNT4Q9P109 453 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 CHORDC1Q9UHD1 332 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 SCAF8Q9UPN6 1271 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 TESMINQ9Y4I5 508 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 C1orf167Q5SNV9 1468 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PLOD2O00469 737 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 FSCN2O14926 492 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 USP12O75317 370 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PIAS1O75925 651 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 EPN2O95208 641 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ATF4P18848 351 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 SOX5P35711 763 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 NUDT1P36639 197 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ETV4P43268 484 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 KCNQ4P56696 695 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 VPS72Q15906 364 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 FKBP9P1Q75LS8 142 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ARMC8Q8IUR7 673 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 TCAIMQ8N3R3 496 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 CMTM5Q96DZ9 223 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 CHID1Q9BWS9 393 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ZNF341Q9BYN7 854 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 POLMQ9NP87 494 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 FARSBQ9NSD9 589 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 SUCOQ9UBS9 1254 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 SERPINB13Q9UIV8 391 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 NOSIPQ9Y314 301 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PCDHB4Q9Y5E5 795 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PHRF1Q9P1Y6 1649 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PCM1Q15154 2024 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 DEAF1O75398 565 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 CCNKO75909 580 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PRKAA2P54646 552 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 HADHBP55084 474 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 TRPC3Q13507 836 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 NEDD8Q15843 81 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 FAM26FQ5R3K3 315 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 KIAA1841Q6NSI8 718 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ATG14Q6ZNE5 492 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 GSTA5Q7RTV2 222 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 CADM2Q8N3J6 435 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 AFAP1L2Q8N4X5 818 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 GRPEL2Q8TAA5 225 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 HTRA1Q92743 480 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ZFYVE19Q96K21 471 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PAFAH2Q99487 392 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 SERPINI1Q99574 410 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 TMEM121Q9BTD3 319 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 MTMR12Q9C0I1 747 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ZNF395Q9H8N7 513 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
NFKB1-212ENST00000600343 PCSK1NQ9UHG2 260 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 GAKO14976 1311 aa10.12□□□□□ -0.79
NFKB1-212ENST00000600343 ERVH48-1M5A8F1 160 aa10.11□□□□□ -0.79
NFKB1-212ENST00000600343 RFPL2O75678 378 aa10.11□□□□□ -0.79
NFKB1-212ENST00000600343 ZMPSTE24O75844 475 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms