RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 KIF5AQ12840 1032 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 PIGHQ14442 188 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 TRIM68Q6AZZ1 485 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 NADSYN1Q6IA69 706 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 CCDC185Q8N715 623 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 NXPE3Q969Y0 559 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 PEBP4Q96S96 227 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 DCLK3Q9C098 648 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 TKTL2Q9H0I9 626 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 WDCPQ9H6R7 721 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 CD320Q9NPF0 282 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 PAXBP1Q9Y5B6 917 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 SNX10Q9Y5X0 201 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 XIRP2A4UGR9 3374 aa20.78■□□□□ 0.92
SHKBP1-222ENST00000600320 GOLGA6L7A0A1B0GV03 622 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 ACSL4O60488 711 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 BUB1BO60566 1050 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 APOEP02649 317 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 ARSAP15289 507 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 MIPP30301 263 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 GDI1P31150 447 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 HARS2P49590 506 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 BRMS1LQ5PSV4 323 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 SCYL2Q6P3W7 929 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 SND1Q7KZF4 910 aaKnown RBP eCLIP20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 UNC45BQ8IWX7 931 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 YAF2Q8IY57 180 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 TPCN2Q8NHX9 752 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 OSCP1Q8WVF1 389 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 FAM83CQ9BQN1 747 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 TRMT61BQ9BVS5 477 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 COL25A1Q9BXS0 654 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 MAGEB5Q9BZ81 275 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 GOLPH3Q9H4A6 298 aa20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 DUS2Q9NX74 493 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-222ENST00000600320 MYO10Q9HD67 2058 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 MACROD2A1Z1Q3 448 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 NARSO43776 548 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 RNF8O76064 485 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 GGCXP38435 758 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 ACAP1Q15027 740 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 ARHGAP29Q52LW3 1261 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 FAM133BQ5BKY9 247 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 TJAP1Q5JTD0 557 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 CC2D1AQ6P1N0 951 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 ZNF662Q6ZS27 426 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 CYP4V2Q6ZWL3 525 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 TXLNBQ8N3L3 684 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 KIAA1958Q8N8K9 716 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 ATP6V0D2Q8N8Y2 350 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 P2RY11Q96G91 374 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 HPS4Q9NQG7 708 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 THG1LQ9NWX6 298 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 PCSK1NQ9UHG2 260 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 STOML2Q9UJZ1 356 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 HYOU1Q9Y4L1 999 aa20.76■□□□□ 0.91
SHKBP1-222ENST00000600320 ARNTLO00327 626 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 CHADO15335 359 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 PAGE1O75459 146 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 MOCS3O95396 460 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 LATS1O95835 1130 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 SLC2A3P11169 496 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 IL1R2P27930 398 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 SLC6A4P31645 630 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 MAN1A1P33908 653 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 ADRA1BP35368 520 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 PCK1P35558 622 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 IFNAR2P48551 515 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 VCPP55072 806 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 TAS2R40P59535 323 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 TNK2Q07912 1038 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 EML3Q32P44 896 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 PIK3R6Q5UE93 754 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 TXNRD3NBQ6F5E7 133 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 FAM217AQ8IXS0 508 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 AZIN2Q96A70 460 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 MYEOVQ96EZ4 313 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 BTN2A3PQ96KV6 586 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 LZTFL1Q9NQ48 299 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 GPATCH2LQ9NWQ4 482 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 TBC1D14Q9P2M4 693 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 ZNF510Q9Y2H8 683 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 HS3ST4Q9Y661 456 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 C5orf42Q9H799 3197 aa20.75■□□□□ 0.91
SHKBP1-222ENST00000600320 GRID2IPA4D2P6 1211 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 GFRA2O00451 464 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 TRDMT1O14717 391 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 DESP17661 470 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 SLC11A2P49281 568 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 NAP1L1P55209 391 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 SLC25A11Q02978 314 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 TDGQ13569 410 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 MS4A13Q5J8X5 152 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 RAP1GAP2Q684P5 730 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 RNF135Q8IUD6 432 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 REXO1L1PQ8IX06 675 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 GJD3Q8N144 294 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 NTAN1Q96AB6 310 aa20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 PRMT1Q99873 361 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-222ENST00000600320 TSGA10Q9BZW7 698 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms