RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 TYRP14679 529 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 HOXA6P31267 233 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 GRIA2P42262 883 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 TNFRSF4P43489 277 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 CXCL12P48061 93 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 SLC6A11P48066 632 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 NOMO3P69849 1222 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 SATB1Q01826 763 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 EIF4EBP2Q13542 120 aaPredicted RBP16.85■□□□□ 0.29
LSM4-206ENST00000600289 NR1I3Q14994 352 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 ANO4Q32M45 955 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 FYB2Q5VWT5 728 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 FAM183BPQ6ZVS7 135 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 LUZP1Q86V48 1076 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 DENND1CQ8IV53 801 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 UNC45BQ8IWX7 931 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 SLC39A13Q96H72 371 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 PIWIL1Q96J94 861 aaKnown RBP16.85■□□□□ 0.29
LSM4-206ENST00000600289 XPO6Q96QU8 1125 aaKnown RBP16.85■□□□□ 0.29
LSM4-206ENST00000600289 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 ARHGEF4Q9NR80 690 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 DEC1Q9P2X7 70 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 FBXO10Q9UK96 956 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 NAALADL1Q9UQQ1 740 aa16.85■□□□□ 0.29
LSM4-206ENST00000600289 NEDD8-MDP1E9PL57 170 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 SLC30A4O14863 429 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 LILRB5O75023 590 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 DAB1O75553 588 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 MMEP08473 750 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 CHRNB2P17787 502 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 TBX4P57082 545 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 MRPS21P82921 87 aaKnown RBP16.84■□□□□ 0.29
LSM4-206ENST00000600289 FMO1Q01740 532 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 SLC6A3Q01959 620 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 CSTF1Q05048 431 aaKnown RBP16.84■□□□□ 0.29
LSM4-206ENST00000600289 DMWDQ09019 674 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 HSF5Q4G112 596 aaPredicted RBP16.84■□□□□ 0.29
LSM4-206ENST00000600289 ADGRF1Q5T601 910 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 TAF3Q5VWG9 929 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 SYPL2Q5VXT5 272 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 TAC4Q86UU9 113 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 TERB1Q8NA31 727 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 ZBTB44Q8NCP5 570 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 MSANTD4Q8NCY6 345 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 SLC20A1Q8WUM9 679 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 ACDQ96AP0 544 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 FCRL2Q96LA5 508 aaPredicted RBP16.84■□□□□ 0.29
LSM4-206ENST00000600289 EDEM3Q9BZQ6 932 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 PCDHGA2Q9Y5H1 932 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 NBEAQ8NFP9 2946 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 PLXND1Q9Y4D7 1925 aa16.84■□□□□ 0.29
LSM4-206ENST00000600289 MUC22E2RYF6 1773 aaPredicted RBP16.83■□□□□ 0.28
LSM4-206ENST00000600289 GOLGA6L19H0YKK7 550 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 K7ESF4 209 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 CAPN9O14815 690 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 IRAK2O43187 625 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 SERPINC1P01008 464 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 FERP16591 822 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 PMLP29590 882 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 NRLP54845 237 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 TAF5Q15542 800 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 FIGNQ5HY92 759 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 RNF43Q68DV7 783 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 OR6B2Q6IFH4 312 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 PKN3Q6P5Z2 889 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 TPGS1Q6ZTW0 290 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 NUDT18Q6ZVK8 323 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 SYT13Q7L8C5 426 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 ARCQ7LC44 396 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 ERICH1Q86X53 443 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 USP33Q8TEY7 942 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 BAP1Q92560 729 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 C18orf8Q96DM3 657 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 P2RY11Q96G91 374 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 NAP1L5Q96NT1 182 aaPredicted RBP16.83■□□□□ 0.28
LSM4-206ENST00000600289 TTYH3Q9C0H2 523 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 SYNCQ9H7C4 482 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 TMEM51Q9NW97 253 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 ZSCAN32Q9NX65 697 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 RRN3Q9NYV6 651 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 ANGPTL2Q9UKU9 493 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 SLC27A6Q9Y2P4 619 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 STARD13Q9Y3M8 1113 aa16.83■□□□□ 0.28
LSM4-206ENST00000600289 GCN1Q92616 2671 aaKnown RBP16.83■□□□□ 0.28
LSM4-206ENST00000600289 CCDC163A0A0D9SF12 145 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 TRUB2O95900 331 aaKnown RBP16.82■□□□□ 0.28
LSM4-206ENST00000600289 CYBBP04839 570 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 CCDC172P0C7W6 258 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 UNGP13051 313 aaPredicted RBP16.82■□□□□ 0.28
LSM4-206ENST00000600289 SLC11A2P49281 568 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 FANCCQ00597 558 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 KDSRQ06136 332 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 MESP2Q0VG99 397 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 MPPE1Q53F39 396 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 GRAMD4Q6IC98 578 aa16.82■□□□□ 0.28
LSM4-206ENST00000600289 XYLT1Q86Y38 959 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms