RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PRCCQ92733 491 aaPredicted RBP6.41□□□□□ -1.38
VRK3-220ENST00000600259 JAKMIP2Q96AA8 810 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 LRIG1Q96JA1 1093 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 LMLNQ96KR4 655 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 NT5C1AQ9BXI3 368 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 UBXN6Q9BZV1 441 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 DCLK3Q9C098 648 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 CYP3A43Q9HB55 503 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 TM9SF3Q9HD45 589 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 STOML2Q9UJZ1 356 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 NAGPAQ9UK23 515 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.41□□□□□ -1.38
VRK3-220ENST00000600259 ANKRD6Q9Y2G4 727 aa6.41□□□□□ -1.38
VRK3-220ENST00000600259 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.41□□□□□ -1.38
VRK3-220ENST00000600259 PTPRBP23467 1997 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 ZNF462Q96JM2 2506 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 FAM149AA5PLN7 773 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 H0Y8X5 98 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 HAX1O00165 279 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 MAPK13O15264 365 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 STX6O43752 255 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 SYNCRIPO60506 623 aaKnown RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 GABBR2O75899 941 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 C1QL1O75973 258 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 ZIC2O95409 532 aaPredicted RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 IGHV4-34P06331 123 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 EPHX1P07099 455 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 HMBSP08397 361 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 RALAP11233 206 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 P4HA1P13674 534 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 HOXD9P28356 352 aaPredicted RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 HLA-FP30511 346 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 AFMP43652 599 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 GRIA4P48058 902 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 AFF3P51826 1226 aaKnown RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 RPS14P62263 151 aaKnown RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 PDE4CQ08493 712 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 GOLGA8FQ08AF8 430 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 GOLGA8DPQ0D2H9 430 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 EFEMP1Q12805 493 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 SUZ12Q15022 739 aaKnown RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 SHBQ15464 509 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 RESP18Q5W5W9 173 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 ANKS1BQ7Z6G8 1248 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 ADIPOR2Q86V24 386 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 FAM124AQ86V42 546 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 DENND1CQ8IV53 801 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 GALNT15Q8N3T1 639 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.4□□□□□ -1.38
VRK3-220ENST00000600259 PDCD7Q8N8D1 485 aaKnown RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 GOLGA5Q8TBA6 731 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 ADAM32Q8TC27 787 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 TAS1R2Q8TE23 839 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 UCMAQ8WVF2 138 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 NDRG1Q92597 394 aaKnown RBP6.4□□□□□ -1.38
VRK3-220ENST00000600259 SEMA4DQ92854 862 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 IGSF8Q969P0 613 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 BIRC7Q96CA5 298 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 MYO19Q96H55 970 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 EBF2Q9HAK2 575 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 MAGEF1Q9HAY2 307 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 PRSS16Q9NQE7 514 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 SERTAD1Q9UHV2 236 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 PCDHA7Q9UN72 937 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 TRAF3IP3Q9Y228 551 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 PTPRQQ9UMZ3 2332 aa6.4□□□□□ -1.38
VRK3-220ENST00000600259 MGAQ8IWI9 3026 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 TENM4Q6N022 2769 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 A0A1B0GTQ1 180 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 A0A1W2PR77 199 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 SLC12A8A0AV02 714 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 E9PAM4 449 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 TULP2O00295 520 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 WNT9AO14904 365 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 ACTN4O43707 911 aaKnown RBP6.39□□□□□ -1.39
VRK3-220ENST00000600259 TLX3O43711 291 aaPredicted RBP6.39□□□□□ -1.39
VRK3-220ENST00000600259 SEMA4FO95754 770 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 NR3C1P04150 777 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 WNT1P04628 370 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 PDIA4P13667 645 aaKnown RBP6.39□□□□□ -1.39
VRK3-220ENST00000600259 CD27P26842 260 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 ITPKBP27987 946 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 GRK6P43250 576 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 SGSHP51688 502 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 VAMP7P51809 220 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 RAD23BP54727 409 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 ZBTB16Q05516 673 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 ENPEPQ07075 957 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 KCNJ12Q14500 433 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 NFIL3Q16649 462 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 KMT5BQ4FZB7 885 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 PRAMEF14Q5SWL7 426 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 ARHGAP17Q68EM7 881 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 DHRS13Q6UX07 377 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 LAYNQ6UX15 382 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 SERPINA13PQ6UXR4 307 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 TADA2BQ86TJ2 420 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 PIGZQ86VD9 579 aa6.39□□□□□ -1.39
VRK3-220ENST00000600259 ZNF366Q8N895 744 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms