RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PJA1Q8NG27 643 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 ADAM32Q8TC27 787 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 ELSPBP1Q96BH3 223 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 KXD1Q9BQD3 176 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 SLC2A4RGQ9NR83 387 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 RRN3Q9NYV6 651 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 CALCOCO1Q9P1Z2 691 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 INTUQ9ULD6 942 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 PCDHA13Q9Y5I0 950 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 SCINQ9Y6U3 715 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 TMEM191CA6NGB0 347 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 DPYSL4O14531 572 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 STC2O76061 302 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 IGLV3-27P01718 113 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 GLULP15104 373 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 COG7P83436 770 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 OGDHQ02218 1023 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 NNTQ13423 1086 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 TRIP4Q15650 581 aaPredicted RBP19.62■□□□□ 0.73
CCDC9-205ENST00000600117 ZNF528Q3MIS6 628 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 SLC25A52Q3SY17 297 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 CCDC14Q49A88 953 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 VITQ6UXI7 678 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 MAML2Q8IZL2 1156 aaPredicted RBP19.62■□□□□ 0.73
CCDC9-205ENST00000600117 GPR161Q8N6U8 529 aaKnown RBP19.62■□□□□ 0.73
CCDC9-205ENST00000600117 ACRBPQ8NEB7 543 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 CTNNBL1Q8WYA6 563 aaPredicted RBP19.62■□□□□ 0.73
CCDC9-205ENST00000600117 E2F7Q96AV8 911 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 CFAP57Q96MR6 1250 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 SERPINB11Q96P15 392 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 TBCBQ99426 244 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 TRIM7Q9C029 511 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 CFAP97Q9P2B7 532 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 STAP1Q9ULZ2 295 aa19.62■□□□□ 0.73
CCDC9-205ENST00000600117 HBS1LQ9Y450 684 aaKnown RBP19.62■□□□□ 0.73
CCDC9-205ENST00000600117 ARHGAP6O43182 974 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 PDGFRAP16234 1089 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 GPD1P21695 349 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 PTPN9P43378 593 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 SULT1E1P49888 294 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 ZNF252P-AS1Q0IIN9 211 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 CCDC173Q0VFZ6 552 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 SPA17Q15506 151 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 DCUN1D2Q6PH85 259 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 DDX42Q86XP3 938 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC9-205ENST00000600117 MFSD6LQ8IWD5 586 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 PGAP3Q96FM1 320 aaPredicted RBP19.61■□□□□ 0.73
CCDC9-205ENST00000600117 SLC39A13Q96H72 371 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 NUP85Q9BW27 656 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 MRPL47Q9HD33 250 aaKnown RBP19.61■□□□□ 0.73
CCDC9-205ENST00000600117 NCDNQ9UBB6 729 aa19.61■□□□□ 0.73
CCDC9-205ENST00000600117 M0QYT0 321 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 ENDOD1O94919 500 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 HMBSP08397 361 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 IRF1P10914 325 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 SDC4P31431 198 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 ZNF143P52747 638 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-205ENST00000600117 ATXN1P54253 815 aaKnown RBP19.6■□□□□ 0.73
CCDC9-205ENST00000600117 TBX4P57082 545 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 STARD6P59095 220 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 RING1Q06587 406 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 FCHO2Q0JRZ9 810 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 C15orf59Q2T9L4 293 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-205ENST00000600117 BPIFB1Q8TDL5 484 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 CENPIQ92674 756 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-205ENST00000600117 PLD4Q96BZ4 506 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 SHDQ96IW2 340 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 FCRL2Q96LA5 508 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-205ENST00000600117 DESI2Q9BSY9 194 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 FOXQ1Q9C009 403 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 KCNF1Q9H3M0 494 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 FAM204AQ9H8W3 233 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 DDIT4Q9NX09 232 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 FBXO4Q9UKT5 387 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 TFR2Q9UP52 801 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 TLR6Q9Y2C9 796 aa19.6■□□□□ 0.73
CCDC9-205ENST00000600117 E2F8A0AVK6 867 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 RCCD1A6NED2 376 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 CCP110O43303 1012 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 KLKB1P03952 638 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 PTMAP06454 111 aaKnown RBP19.59■□□□□ 0.73
CCDC9-205ENST00000600117 KPNA1P52294 538 aaPredicted RBP19.59■□□□□ 0.73
CCDC9-205ENST00000600117 TCEAL1Q15170 157 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 RAB6CQ53S08 254 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 SH3PXD2AQ5TCZ1 1133 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 Q6ZNB5 142 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 HTR3DQ70Z44 454 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 KIAA1958Q8N8K9 716 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 FNIP1Q8TF40 1166 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 DEPDC1BQ8WUY9 529 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 CNPY3Q9BT09 278 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 RAB6CQ9H0N0 254 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 PIGVQ9NUD9 493 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 UVRAGQ9P2Y5 699 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 BAHCC1Q9P281 2608 aa19.59■□□□□ 0.73
CCDC9-205ENST00000600117 PRR5-ARHGAP8B1AHC4 643 aa19.58■□□□□ 0.72
CCDC9-205ENST00000600117 SCAMP3O14828 347 aaKnown RBP19.58■□□□□ 0.72
CCDC9-205ENST00000600117 MTA2O94776 668 aa19.58■□□□□ 0.72
CCDC9-205ENST00000600117 IPO7O95373 1038 aaKnown RBP19.58■□□□□ 0.72
CCDC9-205ENST00000600117 PSMC3P17980 439 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms